RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
AC004448.3-201ENST00000435953 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
AC004448.3-201ENST00000435953 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
AC004448.3-201ENST00000435953 MT1EP04732 61 aa3.62□□□□□ -1.83
AC004448.3-201ENST00000435953 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
AC004448.3-201ENST00000435953 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
AC004448.3-201ENST00000435953 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
AC004448.3-201ENST00000435953 MT1LQ93083 61 aa3.53□□□□□ -1.84
AC004448.3-201ENST00000435953 SPRR2EP22531 72 aa3.52□□□□□ -1.85
AC004448.3-201ENST00000435953 SPRR2BP35325 72 aa3.52□□□□□ -1.85
AC004448.3-201ENST00000435953 SPRR2AP35326 72 aa3.52□□□□□ -1.85
AC004448.3-201ENST00000435953 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
AC004448.3-201ENST00000435953 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
AC004448.3-201ENST00000435953 MT1GP13640 62 aa3.49□□□□□ -1.85
AC004448.3-201ENST00000435953 NEBP20929 6669 aa3.48□□□□□ -1.85
AC004448.3-201ENST00000435953 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
AC004448.3-201ENST00000435953 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
AC004448.3-201ENST00000435953 MT1MQ8N339 61 aa3.43□□□□□ -1.86
AC004448.3-201ENST00000435953 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
AC004448.3-201ENST00000435953 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
AC004448.3-201ENST00000435953 SPRR2DP22532 72 aa3.4□□□□□ -1.87
AC004448.3-201ENST00000435953 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
AC004448.3-201ENST00000435953 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
AC004448.3-201ENST00000435953 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
AC004448.3-201ENST00000435953 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
AC004448.3-201ENST00000435953 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
AC004448.3-201ENST00000435953 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
AC004448.3-201ENST00000435953 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
AC004448.3-201ENST00000435953 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
AC004448.3-201ENST00000435953 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
AC004448.3-201ENST00000435953 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
AC004448.3-201ENST00000435953 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
AC004448.3-201ENST00000435953 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
AC004448.3-201ENST00000435953 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
AC004448.3-201ENST00000435953 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
AC004448.3-201ENST00000435953 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
AC004448.3-201ENST00000435953 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
AC004448.3-201ENST00000435953 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
AC004448.3-201ENST00000435953 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
AC004448.3-201ENST00000435953 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
AC004448.3-201ENST00000435953 MT1AP04731 61 aa3□□□□□ -1.93
AC004448.3-201ENST00000435953 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
AC004448.3-201ENST00000435953 MT4P47944 62 aa2.95□□□□□ -1.94
AC004448.3-201ENST00000435953 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
AC004448.3-201ENST00000435953 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
AC004448.3-201ENST00000435953 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
AC004448.3-201ENST00000435953 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
AC004448.3-201ENST00000435953 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
AC004448.3-201ENST00000435953 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
AC004448.3-201ENST00000435953 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
AC004448.3-201ENST00000435953 MT3P25713 68 aa2.75□□□□□ -1.97
AC004448.3-201ENST00000435953 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
AC004448.3-201ENST00000435953 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
AC004448.3-201ENST00000435953 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
AC004448.3-201ENST00000435953 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
AC004448.3-201ENST00000435953 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
AC004448.3-201ENST00000435953 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
AC004448.3-201ENST00000435953 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
AC004448.3-201ENST00000435953 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
AC004448.3-201ENST00000435953 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
AC004448.3-201ENST00000435953 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
AC004448.3-201ENST00000435953 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
AC004448.3-201ENST00000435953 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
AC004448.3-201ENST00000435953 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
AC004448.3-201ENST00000435953 INE1O15225 51 aa2.32□□□□□ -2.04
AC004448.3-201ENST00000435953 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
AC004448.3-201ENST00000435953 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
AC004448.3-201ENST00000435953 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
AC004448.3-201ENST00000435953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
AC004448.3-201ENST00000435953 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
AC004448.3-201ENST00000435953 PRM1P04553 51 aa2.03□□□□□ -2.08
AC004448.3-201ENST00000435953 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
AC004448.3-201ENST00000435953 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
AC004448.3-201ENST00000435953 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
AC004448.3-201ENST00000435953 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
AC004448.3-201ENST00000435953 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
AC004448.3-201ENST00000435953 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 98.5 ms