RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
CLDN4-202ENST00000431918 MT1GP13640 62 aa3.86□□□□□ -1.79
CLDN4-202ENST00000431918 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
CLDN4-202ENST00000431918 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CLDN4-202ENST00000431918 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.8
CLDN4-202ENST00000431918 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
CLDN4-202ENST00000431918 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
CLDN4-202ENST00000431918 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CLDN4-202ENST00000431918 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
CLDN4-202ENST00000431918 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
CLDN4-202ENST00000431918 MT1MQ8N339 61 aa3.72□□□□□ -1.81
CLDN4-202ENST00000431918 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
CLDN4-202ENST00000431918 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
CLDN4-202ENST00000431918 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
CLDN4-202ENST00000431918 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
CLDN4-202ENST00000431918 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
CLDN4-202ENST00000431918 SPRR2EP22531 72 aa3.62□□□□□ -1.83
CLDN4-202ENST00000431918 SPRR2BP35325 72 aa3.62□□□□□ -1.83
CLDN4-202ENST00000431918 SPRR2AP35326 72 aa3.62□□□□□ -1.83
CLDN4-202ENST00000431918 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
CLDN4-202ENST00000431918 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
CLDN4-202ENST00000431918 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
CLDN4-202ENST00000431918 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
CLDN4-202ENST00000431918 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
CLDN4-202ENST00000431918 SPRR2DP22532 72 aa3.48□□□□□ -1.85
CLDN4-202ENST00000431918 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
CLDN4-202ENST00000431918 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CLDN4-202ENST00000431918 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
CLDN4-202ENST00000431918 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
CLDN4-202ENST00000431918 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CLDN4-202ENST00000431918 MT1AP04731 61 aa3.31□□□□□ -1.88
CLDN4-202ENST00000431918 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CLDN4-202ENST00000431918 PRM1P04553 51 aa3.28□□□□□ -1.88
CLDN4-202ENST00000431918 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
CLDN4-202ENST00000431918 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
CLDN4-202ENST00000431918 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
CLDN4-202ENST00000431918 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
CLDN4-202ENST00000431918 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
CLDN4-202ENST00000431918 MT4P47944 62 aa3.15□□□□□ -1.91
CLDN4-202ENST00000431918 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
CLDN4-202ENST00000431918 MT3P25713 68 aa3.11□□□□□ -1.91
CLDN4-202ENST00000431918 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
CLDN4-202ENST00000431918 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
CLDN4-202ENST00000431918 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CLDN4-202ENST00000431918 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
CLDN4-202ENST00000431918 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
CLDN4-202ENST00000431918 NEBP20929 6669 aa2.99□□□□□ -1.93
CLDN4-202ENST00000431918 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
CLDN4-202ENST00000431918 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
CLDN4-202ENST00000431918 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
CLDN4-202ENST00000431918 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CLDN4-202ENST00000431918 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CLDN4-202ENST00000431918 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
CLDN4-202ENST00000431918 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CLDN4-202ENST00000431918 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
CLDN4-202ENST00000431918 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CLDN4-202ENST00000431918 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
CLDN4-202ENST00000431918 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
CLDN4-202ENST00000431918 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
CLDN4-202ENST00000431918 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
CLDN4-202ENST00000431918 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
CLDN4-202ENST00000431918 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CLDN4-202ENST00000431918 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
CLDN4-202ENST00000431918 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CLDN4-202ENST00000431918 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
CLDN4-202ENST00000431918 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
CLDN4-202ENST00000431918 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
CLDN4-202ENST00000431918 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CLDN4-202ENST00000431918 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
CLDN4-202ENST00000431918 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CLDN4-202ENST00000431918 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CLDN4-202ENST00000431918 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
CLDN4-202ENST00000431918 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
CLDN4-202ENST00000431918 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
CLDN4-202ENST00000431918 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CLDN4-202ENST00000431918 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CLDN4-202ENST00000431918 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms