RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
CALD1-207ENST00000430085 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
CALD1-207ENST00000430085 MT1EP04732 61 aa5.15□□□□□ -1.59
CALD1-207ENST00000430085 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
CALD1-207ENST00000430085 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CALD1-207ENST00000430085 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
CALD1-207ENST00000430085 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
CALD1-207ENST00000430085 MT1LQ93083 61 aa5.07□□□□□ -1.6
CALD1-207ENST00000430085 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
CALD1-207ENST00000430085 NEBP20929 6669 aa5.03□□□□□ -1.6
CALD1-207ENST00000430085 SPRR2EP22531 72 aa4.96□□□□□ -1.62
CALD1-207ENST00000430085 SPRR2BP35325 72 aa4.96□□□□□ -1.62
CALD1-207ENST00000430085 SPRR2AP35326 72 aa4.96□□□□□ -1.62
CALD1-207ENST00000430085 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
CALD1-207ENST00000430085 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CALD1-207ENST00000430085 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
CALD1-207ENST00000430085 MT1GP13640 62 aa4.89□□□□□ -1.63
CALD1-207ENST00000430085 MT1MQ8N339 61 aa4.84□□□□□ -1.63
CALD1-207ENST00000430085 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
CALD1-207ENST00000430085 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
CALD1-207ENST00000430085 SPRR2DP22532 72 aa4.79□□□□□ -1.64
CALD1-207ENST00000430085 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CALD1-207ENST00000430085 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CALD1-207ENST00000430085 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CALD1-207ENST00000430085 H3BS24 57 aa4.7□□□□□ -1.66
CALD1-207ENST00000430085 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
CALD1-207ENST00000430085 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
CALD1-207ENST00000430085 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
CALD1-207ENST00000430085 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CALD1-207ENST00000430085 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
CALD1-207ENST00000430085 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.68
CALD1-207ENST00000430085 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
CALD1-207ENST00000430085 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
CALD1-207ENST00000430085 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
CALD1-207ENST00000430085 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
CALD1-207ENST00000430085 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CALD1-207ENST00000430085 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
CALD1-207ENST00000430085 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
CALD1-207ENST00000430085 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CALD1-207ENST00000430085 MT1AP04731 61 aa4.3□□□□□ -1.72
CALD1-207ENST00000430085 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
CALD1-207ENST00000430085 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
CALD1-207ENST00000430085 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
CALD1-207ENST00000430085 INE1O15225 51 aa4.21□□□□□ -1.74
CALD1-207ENST00000430085 MT4P47944 62 aa4.18□□□□□ -1.74
CALD1-207ENST00000430085 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
CALD1-207ENST00000430085 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
CALD1-207ENST00000430085 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
CALD1-207ENST00000430085 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
CALD1-207ENST00000430085 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CALD1-207ENST00000430085 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CALD1-207ENST00000430085 MT3P25713 68 aa3.9□□□□□ -1.78
CALD1-207ENST00000430085 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
CALD1-207ENST00000430085 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
CALD1-207ENST00000430085 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CALD1-207ENST00000430085 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CALD1-207ENST00000430085 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CALD1-207ENST00000430085 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
CALD1-207ENST00000430085 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
CALD1-207ENST00000430085 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
CALD1-207ENST00000430085 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
CALD1-207ENST00000430085 PRM1P04553 51 aa3.34□□□□□ -1.87
CALD1-207ENST00000430085 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
CALD1-207ENST00000430085 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
CALD1-207ENST00000430085 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
CALD1-207ENST00000430085 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CALD1-207ENST00000430085 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
CALD1-207ENST00000430085 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CALD1-207ENST00000430085 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
CALD1-207ENST00000430085 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
CALD1-207ENST00000430085 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CALD1-207ENST00000430085 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
CALD1-207ENST00000430085 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CALD1-207ENST00000430085 LCE1FQ5T754 118 aa2.56□□□□□ -2
CALD1-207ENST00000430085 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CALD1-207ENST00000430085 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CALD1-207ENST00000430085 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CALD1-207ENST00000430085 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 116.9 ms