RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
PPFIA3-202ENST00000421230 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
PPFIA3-202ENST00000421230 MT1EP04732 61 aa6.5□□□□□ -1.37
PPFIA3-202ENST00000421230 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
PPFIA3-202ENST00000421230 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
PPFIA3-202ENST00000421230 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
PPFIA3-202ENST00000421230 MT1LQ93083 61 aa6.35□□□□□ -1.39
PPFIA3-202ENST00000421230 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
PPFIA3-202ENST00000421230 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
PPFIA3-202ENST00000421230 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
PPFIA3-202ENST00000421230 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
PPFIA3-202ENST00000421230 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
PPFIA3-202ENST00000421230 KRTAP19-3Q7Z4W3 81 aa6.26□□□□□ -1.41
PPFIA3-202ENST00000421230 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
PPFIA3-202ENST00000421230 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
PPFIA3-202ENST00000421230 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
PPFIA3-202ENST00000421230 MT1GP13640 62 aa6.17□□□□□ -1.42
PPFIA3-202ENST00000421230 SPRR2EP22531 72 aa6.17□□□□□ -1.42
PPFIA3-202ENST00000421230 SPRR2BP35325 72 aa6.17□□□□□ -1.42
PPFIA3-202ENST00000421230 SPRR2AP35326 72 aa6.17□□□□□ -1.42
PPFIA3-202ENST00000421230 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
PPFIA3-202ENST00000421230 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
PPFIA3-202ENST00000421230 MT1MQ8N339 61 aa6.13□□□□□ -1.43
PPFIA3-202ENST00000421230 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
PPFIA3-202ENST00000421230 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
PPFIA3-202ENST00000421230 NEBP20929 6669 aa5.97□□□□□ -1.45
PPFIA3-202ENST00000421230 SPRR2DP22532 72 aa5.94□□□□□ -1.46
PPFIA3-202ENST00000421230 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PPFIA3-202ENST00000421230 LCE3BQ5TA77 95 aa5.71□□□□□ -1.49
PPFIA3-202ENST00000421230 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
PPFIA3-202ENST00000421230 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
PPFIA3-202ENST00000421230 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
PPFIA3-202ENST00000421230 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
PPFIA3-202ENST00000421230 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
PPFIA3-202ENST00000421230 MT1AP04731 61 aa5.37□□□□□ -1.55
PPFIA3-202ENST00000421230 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
PPFIA3-202ENST00000421230 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PPFIA3-202ENST00000421230 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
PPFIA3-202ENST00000421230 LCE4AQ5TA78 99 aa5.21□□□□□ -1.57
PPFIA3-202ENST00000421230 MT4P47944 62 aa5.2□□□□□ -1.58
PPFIA3-202ENST00000421230 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
PPFIA3-202ENST00000421230 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
PPFIA3-202ENST00000421230 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
PPFIA3-202ENST00000421230 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
PPFIA3-202ENST00000421230 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
PPFIA3-202ENST00000421230 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
PPFIA3-202ENST00000421230 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
PPFIA3-202ENST00000421230 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
PPFIA3-202ENST00000421230 PRM1P04553 51 aa4.96□□□□□ -1.62
PPFIA3-202ENST00000421230 MT3P25713 68 aa4.87□□□□□ -1.63
PPFIA3-202ENST00000421230 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
PPFIA3-202ENST00000421230 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
PPFIA3-202ENST00000421230 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
PPFIA3-202ENST00000421230 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PPFIA3-202ENST00000421230 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
PPFIA3-202ENST00000421230 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
PPFIA3-202ENST00000421230 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
PPFIA3-202ENST00000421230 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
PPFIA3-202ENST00000421230 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
PPFIA3-202ENST00000421230 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
PPFIA3-202ENST00000421230 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
PPFIA3-202ENST00000421230 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PPFIA3-202ENST00000421230 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
PPFIA3-202ENST00000421230 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
PPFIA3-202ENST00000421230 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
PPFIA3-202ENST00000421230 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
PPFIA3-202ENST00000421230 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
PPFIA3-202ENST00000421230 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
PPFIA3-202ENST00000421230 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PPFIA3-202ENST00000421230 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
PPFIA3-202ENST00000421230 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
PPFIA3-202ENST00000421230 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
PPFIA3-202ENST00000421230 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
PPFIA3-202ENST00000421230 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PPFIA3-202ENST00000421230 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
PPFIA3-202ENST00000421230 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
PPFIA3-202ENST00000421230 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PPFIA3-202ENST00000421230 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 60.1 ms