RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.84
PBX1-203ENST00000420696 MT1EP04732 61 aa3.58□□□□□ -1.84
PBX1-203ENST00000420696 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
PBX1-203ENST00000420696 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
PBX1-203ENST00000420696 MT1MQ8N339 61 aa3.53□□□□□ -1.84
PBX1-203ENST00000420696 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
PBX1-203ENST00000420696 MT1AP04731 61 aa3.45□□□□□ -1.86
PBX1-203ENST00000420696 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
PBX1-203ENST00000420696 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
PBX1-203ENST00000420696 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
PBX1-203ENST00000420696 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
PBX1-203ENST00000420696 MUC2Q02817 5179 aa3.38□□□□□ -1.87
PBX1-203ENST00000420696 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
PBX1-203ENST00000420696 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
PBX1-203ENST00000420696 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
PBX1-203ENST00000420696 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
PBX1-203ENST00000420696 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
PBX1-203ENST00000420696 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PBX1-203ENST00000420696 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
PBX1-203ENST00000420696 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
PBX1-203ENST00000420696 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
PBX1-203ENST00000420696 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
PBX1-203ENST00000420696 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
PBX1-203ENST00000420696 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PBX1-203ENST00000420696 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.89
PBX1-203ENST00000420696 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
PBX1-203ENST00000420696 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
PBX1-203ENST00000420696 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
PBX1-203ENST00000420696 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
PBX1-203ENST00000420696 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
PBX1-203ENST00000420696 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
PBX1-203ENST00000420696 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
PBX1-203ENST00000420696 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
PBX1-203ENST00000420696 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
PBX1-203ENST00000420696 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
PBX1-203ENST00000420696 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
PBX1-203ENST00000420696 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.93
PBX1-203ENST00000420696 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
PBX1-203ENST00000420696 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
PBX1-203ENST00000420696 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
PBX1-203ENST00000420696 USH2AO75445 5202 aa2.82□□□□□ -1.96
PBX1-203ENST00000420696 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
PBX1-203ENST00000420696 KMT2DO14686 5537 aa2.73□□□□□ -1.97
PBX1-203ENST00000420696 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
PBX1-203ENST00000420696 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
PBX1-203ENST00000420696 NEBP20929 6669 aa2.64□□□□□ -1.99
PBX1-203ENST00000420696 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
PBX1-203ENST00000420696 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
PBX1-203ENST00000420696 MDN1Q9NU22 5596 aa2.53□□□□□ -2
PBX1-203ENST00000420696 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
PBX1-203ENST00000420696 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
PBX1-203ENST00000420696 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
PBX1-203ENST00000420696 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PBX1-203ENST00000420696 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
PBX1-203ENST00000420696 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
PBX1-203ENST00000420696 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
PBX1-203ENST00000420696 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
PBX1-203ENST00000420696 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
PBX1-203ENST00000420696 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
PBX1-203ENST00000420696 MUC5ACP98088 5654 aa2□□□□□ -2.09
PBX1-203ENST00000420696 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
PBX1-203ENST00000420696 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
PBX1-203ENST00000420696 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PBX1-203ENST00000420696 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
PBX1-203ENST00000420696 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
PBX1-203ENST00000420696 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
PBX1-203ENST00000420696 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
PBX1-203ENST00000420696 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
PBX1-203ENST00000420696 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PBX1-203ENST00000420696 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PBX1-203ENST00000420696 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PBX1-203ENST00000420696 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 111.2 ms