RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
TVP23C-202ENST00000419890 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TVP23C-202ENST00000419890 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
TVP23C-202ENST00000419890 M0R2T5 61 aa3.12□□□□□ -1.91
TVP23C-202ENST00000419890 MT1HP80294 61 aa3.12□□□□□ -1.91
TVP23C-202ENST00000419890 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
TVP23C-202ENST00000419890 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TVP23C-202ENST00000419890 TNP1P09430 55 aa3.1□□□□□ -1.91
TVP23C-202ENST00000419890 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.92
TVP23C-202ENST00000419890 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
TVP23C-202ENST00000419890 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
TVP23C-202ENST00000419890 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
TVP23C-202ENST00000419890 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
TVP23C-202ENST00000419890 MT2AP02795 61 aa2.93□□□□□ -1.94
TVP23C-202ENST00000419890 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
TVP23C-202ENST00000419890 INE1O15225 51 aa2.92□□□□□ -1.94
TVP23C-202ENST00000419890 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
TVP23C-202ENST00000419890 MT1FP04733 61 aa2.9□□□□□ -1.95
TVP23C-202ENST00000419890 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
TVP23C-202ENST00000419890 USH2AO75445 5202 aa2.86□□□□□ -1.95
TVP23C-202ENST00000419890 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
TVP23C-202ENST00000419890 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
TVP23C-202ENST00000419890 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
TVP23C-202ENST00000419890 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
TVP23C-202ENST00000419890 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
TVP23C-202ENST00000419890 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
TVP23C-202ENST00000419890 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
TVP23C-202ENST00000419890 MT1XP80297 61 aa2.7□□□□□ -1.98
TVP23C-202ENST00000419890 MT1BP07438 61 aa2.69□□□□□ -1.98
TVP23C-202ENST00000419890 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.98
TVP23C-202ENST00000419890 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
TVP23C-202ENST00000419890 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
TVP23C-202ENST00000419890 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
TVP23C-202ENST00000419890 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
TVP23C-202ENST00000419890 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
TVP23C-202ENST00000419890 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
TVP23C-202ENST00000419890 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
TVP23C-202ENST00000419890 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
TVP23C-202ENST00000419890 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
TVP23C-202ENST00000419890 NEBP20929 6669 aa2.48□□□□□ -2.01
TVP23C-202ENST00000419890 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
TVP23C-202ENST00000419890 KMT2DO14686 5537 aa2.44□□□□□ -2.02
TVP23C-202ENST00000419890 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
TVP23C-202ENST00000419890 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
TVP23C-202ENST00000419890 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
TVP23C-202ENST00000419890 SPRR2EP22531 72 aa2.38□□□□□ -2.03
TVP23C-202ENST00000419890 SPRR2BP35325 72 aa2.38□□□□□ -2.03
TVP23C-202ENST00000419890 SPRR2AP35326 72 aa2.38□□□□□ -2.03
TVP23C-202ENST00000419890 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
TVP23C-202ENST00000419890 MT1LQ93083 61 aa2.37□□□□□ -2.03
TVP23C-202ENST00000419890 MT1EP04732 61 aa2.35□□□□□ -2.03
TVP23C-202ENST00000419890 SPRR2DP22532 72 aa2.3□□□□□ -2.04
TVP23C-202ENST00000419890 MT1GP13640 62 aa2.2□□□□□ -2.06
TVP23C-202ENST00000419890 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
TVP23C-202ENST00000419890 MT1MQ8N339 61 aa2.18□□□□□ -2.06
TVP23C-202ENST00000419890 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
TVP23C-202ENST00000419890 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
TVP23C-202ENST00000419890 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
TVP23C-202ENST00000419890 MT1AP04731 61 aa2.15□□□□□ -2.07
TVP23C-202ENST00000419890 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
TVP23C-202ENST00000419890 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
TVP23C-202ENST00000419890 MT4P47944 62 aa2.01□□□□□ -2.09
TVP23C-202ENST00000419890 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
TVP23C-202ENST00000419890 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
TVP23C-202ENST00000419890 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
TVP23C-202ENST00000419890 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
TVP23C-202ENST00000419890 PRM1P04553 51 aa1.93□□□□□ -2.1
TVP23C-202ENST00000419890 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
TVP23C-202ENST00000419890 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
TVP23C-202ENST00000419890 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
TVP23C-202ENST00000419890 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
TVP23C-202ENST00000419890 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
TVP23C-202ENST00000419890 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
TVP23C-202ENST00000419890 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
TVP23C-202ENST00000419890 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
TVP23C-202ENST00000419890 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
TVP23C-202ENST00000419890 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
TVP23C-202ENST00000419890 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 124 ms