RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 C18orf32Q8TCD1 76 aa1.48□□□□□ -2.17
LINC00343-202ENST00000415294 MRPL34Q9BQ48 92 aaKnown RBP1.48□□□□□ -2.17
LINC00343-202ENST00000415294 PLNP26678 52 aa1.47□□□□□ -2.17
LINC00343-202ENST00000415294 MUSTN1Q8IVN3 82 aa1.47□□□□□ -2.17
LINC00343-202ENST00000415294 A0A0D9SG42 100 aa1.46□□□□□ -2.18
LINC00343-202ENST00000415294 CLLU1Q5K131 121 aa1.46□□□□□ -2.18
LINC00343-202ENST00000415294 PMCHL2Q9BQD1 86 aa1.46□□□□□ -2.18
LINC00343-202ENST00000415294 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
LINC00343-202ENST00000415294 CCDC179H3BU77 68 aa1.45□□□□□ -2.18
LINC00343-202ENST00000415294 CCKP06307 115 aa1.45□□□□□ -2.18
LINC00343-202ENST00000415294 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
LINC00343-202ENST00000415294 SEC11CQ9BY50 192 aa1.45□□□□□ -2.18
LINC00343-202ENST00000415294 ATOH7Q8N100 152 aa1.44□□□□□ -2.18
LINC00343-202ENST00000415294 MMP24-AS1A0A0U1RRL7 71 aa1.43□□□□□ -2.18
LINC00343-202ENST00000415294 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
LINC00343-202ENST00000415294 IGKCP01834 107 aa1.43□□□□□ -2.18
LINC00343-202ENST00000415294 IFITM1P13164 125 aa1.42□□□□□ -2.18
LINC00343-202ENST00000415294 PEA15Q15121 130 aa1.42□□□□□ -2.18
LINC00343-202ENST00000415294 COPS9Q8WXC6 57 aa1.42□□□□□ -2.18
LINC00343-202ENST00000415294 NDUFC1O43677 76 aa1.41□□□□□ -2.18
LINC00343-202ENST00000415294 MT1AP04731 61 aa1.4□□□□□ -2.18
LINC00343-202ENST00000415294 BVES-AS1Q5T3Y7 98 aa1.4□□□□□ -2.18
LINC00343-202ENST00000415294 LINC01545Q5VT33 79 aa1.4□□□□□ -2.18
LINC00343-202ENST00000415294 TMEM218A2RU14 115 aa1.4□□□□□ -2.19
LINC00343-202ENST00000415294 M0R143 59 aa1.4□□□□□ -2.19
LINC00343-202ENST00000415294 GTF2H5Q6ZYL4 71 aa1.4□□□□□ -2.19
LINC00343-202ENST00000415294 SERP1Q9Y6X1 66 aa1.4□□□□□ -2.19
LINC00343-202ENST00000415294 HSD52Q0P140 79 aa1.39□□□□□ -2.19
LINC00343-202ENST00000415294 C20orf197Q8N268 126 aa1.38□□□□□ -2.19
LINC00343-202ENST00000415294 SNCGO76070 127 aa1.36□□□□□ -2.19
LINC00343-202ENST00000415294 LEPROTL1O95214 131 aa1.36□□□□□ -2.19
LINC00343-202ENST00000415294 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
LINC00343-202ENST00000415294 SVBPQ8N300 66 aa1.35□□□□□ -2.19
LINC00343-202ENST00000415294 COL5A1-AS1Q5SY13 56 aa1.34□□□□□ -2.2
LINC00343-202ENST00000415294 H0YGX0 51 aa1.3□□□□□ -2.2
LINC00343-202ENST00000415294 ATP5EP56381 51 aaPredicted RBP1.3□□□□□ -2.2
LINC00343-202ENST00000415294 K7EP34 96 aa1.28□□□□□ -2.2
LINC00343-202ENST00000415294 DMAC1Q96GE9 116 aa1.27□□□□□ -2.21
LINC00343-202ENST00000415294 VAMP8Q9BV40 100 aa1.27□□□□□ -2.21
LINC00343-202ENST00000415294 SPTSSBQ8NFR3 76 aa1.26□□□□□ -2.21
LINC00343-202ENST00000415294 PYY3Q5JQD4 70 aa1.24□□□□□ -2.21
LINC00343-202ENST00000415294 SYS1-DBNDD2H3BUS1 97 aa1.23□□□□□ -2.21
LINC00343-202ENST00000415294 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
LINC00343-202ENST00000415294 CYP4F30PQ9H0H9 118 aa1.23□□□□□ -2.21
LINC00343-202ENST00000415294 ACYP1P07311 99 aa1.2□□□□□ -2.22
LINC00343-202ENST00000415294 NREPQ16612 68 aa1.2□□□□□ -2.22
LINC00343-202ENST00000415294 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
LINC00343-202ENST00000415294 ATOX1O00244 68 aa1.19□□□□□ -2.22
LINC00343-202ENST00000415294 KRTDAPP60985 99 aa1.18□□□□□ -2.22
LINC00343-202ENST00000415294 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
LINC00343-202ENST00000415294 SERP2Q8N6R1 65 aa1.16□□□□□ -2.22
LINC00343-202ENST00000415294 TRAV22A0A0B4J277 110 aa1.15□□□□□ -2.22
LINC00343-202ENST00000415294 APOC3P02656 99 aa1.15□□□□□ -2.22
LINC00343-202ENST00000415294 LINC00208Q96KT6 92 aa1.15□□□□□ -2.22
LINC00343-202ENST00000415294 PRO1854Q9UHT4 67 aa1.15□□□□□ -2.22
LINC00343-202ENST00000415294 CHKB-CPT1BH3BT56 60 aa1.15□□□□□ -2.23
LINC00343-202ENST00000415294 H7BZZ5 65 aa1.15□□□□□ -2.23
LINC00343-202ENST00000415294 UQCR10Q9UDW1 63 aa1.15□□□□□ -2.23
LINC00343-202ENST00000415294 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
LINC00343-202ENST00000415294 COX6CP09669 75 aa1.13□□□□□ -2.23
LINC00343-202ENST00000415294 HIGD1BQ9P298 99 aa1.13□□□□□ -2.23
LINC00343-202ENST00000415294 TP53AIP1Q9HCN2 124 aa1.11□□□□□ -2.23
LINC00343-202ENST00000415294 SPCS1Q9Y6A9 102 aa1.09□□□□□ -2.24
LINC00343-202ENST00000415294 ETDBQ3ZM63 59 aa1.08□□□□□ -2.24
LINC00343-202ENST00000415294 LINC01558Q9Y6Z2 57 aa1.07□□□□□ -2.24
LINC00343-202ENST00000415294 UQCR11O14957 56 aa1.06□□□□□ -2.24
LINC00343-202ENST00000415294 TNP1P09430 55 aa1.06□□□□□ -2.24
LINC00343-202ENST00000415294 ACYP2P14621 99 aa1.06□□□□□ -2.24
LINC00343-202ENST00000415294 PRR15LQ9BU68 103 aa1.05□□□□□ -2.24
LINC00343-202ENST00000415294 LINC00643Q86TS7 51 aa1.02□□□□□ -2.25
LINC00343-202ENST00000415294 H0Y9P7 68 aa0.96□□□□□ -2.26
LINC00343-202ENST00000415294 COX8AP10176 69 aa0.94□□□□□ -2.26
LINC00343-202ENST00000415294 ATP5EP2Q5VTU8 51 aa0.92□□□□□ -2.26
LINC00343-202ENST00000415294 A0A1B0GU69 56 aa0.9□□□□□ -2.26
LINC00343-202ENST00000415294 ATXN8Q156A1 80 aa0.9□□□□□ -2.26
LINC00343-202ENST00000415294 UBL5Q9BZL1 73 aa0.83□□□□□ -2.28
LINC00343-202ENST00000415294 PRM1P04553 51 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 69.2 ms