RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 KRTAP2-3P0C7H8 128 aa1.98□□□□□ -2.09
PCDH18-202ENST00000412923 KRTAP19-8Q3LI54 63 aa1.98□□□□□ -2.09
PCDH18-202ENST00000412923 KRTAP2-4Q9BYR9 128 aa1.98□□□□□ -2.09
PCDH18-202ENST00000412923 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
PCDH18-202ENST00000412923 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
PCDH18-202ENST00000412923 KRTAP19-2Q3LHN2 52 aa1.95□□□□□ -2.1
PCDH18-202ENST00000412923 SPRR2AP35326 72 aa1.95□□□□□ -2.1
PCDH18-202ENST00000412923 MT1LQ93083 61 aa1.94□□□□□ -2.1
PCDH18-202ENST00000412923 USH2AO75445 5202 aa1.93□□□□□ -2.1
PCDH18-202ENST00000412923 SPRR2BP35325 72 aa1.93□□□□□ -2.1
PCDH18-202ENST00000412923 KMT2DO14686 5537 aa1.93□□□□□ -2.1
PCDH18-202ENST00000412923 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
PCDH18-202ENST00000412923 SPRR2EP22531 72 aa1.92□□□□□ -2.1
PCDH18-202ENST00000412923 MT1GP13640 62 aa1.91□□□□□ -2.1
PCDH18-202ENST00000412923 MT1EP04732 61 aa1.88□□□□□ -2.11
PCDH18-202ENST00000412923 KRTAP4-8A0A0G2JLE6 195 aa1.88□□□□□ -2.11
PCDH18-202ENST00000412923 MT1XP80297 61 aa1.87□□□□□ -2.11
PCDH18-202ENST00000412923 MT1AP04731 61 aa1.87□□□□□ -2.11
PCDH18-202ENST00000412923 KRTAP9-8Q9BYQ0 159 aa1.87□□□□□ -2.11
PCDH18-202ENST00000412923 SPRR2DP22532 72 aa1.86□□□□□ -2.11
PCDH18-202ENST00000412923 MT1BP07438 61 aa1.84□□□□□ -2.12
PCDH18-202ENST00000412923 FSIP2Q5CZC0 6907 aa1.8□□□□□ -2.12
PCDH18-202ENST00000412923 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
PCDH18-202ENST00000412923 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
PCDH18-202ENST00000412923 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.12
PCDH18-202ENST00000412923 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
PCDH18-202ENST00000412923 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
PCDH18-202ENST00000412923 KRTAP2-2Q9BYT5 123 aa1.76□□□□□ -2.13
PCDH18-202ENST00000412923 KRTAP4-11Q9BYQ6 195 aa1.74□□□□□ -2.13
PCDH18-202ENST00000412923 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
PCDH18-202ENST00000412923 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
PCDH18-202ENST00000412923 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
PCDH18-202ENST00000412923 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
PCDH18-202ENST00000412923 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
PCDH18-202ENST00000412923 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
PCDH18-202ENST00000412923 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
PCDH18-202ENST00000412923 MT1MQ8N339 61 aa1.67□□□□□ -2.14
PCDH18-202ENST00000412923 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
PCDH18-202ENST00000412923 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
PCDH18-202ENST00000412923 MT4P47944 62 aa1.64□□□□□ -2.15
PCDH18-202ENST00000412923 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
PCDH18-202ENST00000412923 LCE1DQ5T752 114 aa1.62□□□□□ -2.15
PCDH18-202ENST00000412923 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
PCDH18-202ENST00000412923 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
PCDH18-202ENST00000412923 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
PCDH18-202ENST00000412923 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
PCDH18-202ENST00000412923 KRTAP4-3Q9BYR4 195 aa1.59□□□□□ -2.15
PCDH18-202ENST00000412923 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
PCDH18-202ENST00000412923 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
PCDH18-202ENST00000412923 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
PCDH18-202ENST00000412923 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
PCDH18-202ENST00000412923 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
PCDH18-202ENST00000412923 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
PCDH18-202ENST00000412923 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
PCDH18-202ENST00000412923 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
PCDH18-202ENST00000412923 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
PCDH18-202ENST00000412923 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
PCDH18-202ENST00000412923 NEBP20929 6669 aa1.36□□□□□ -2.19
PCDH18-202ENST00000412923 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
PCDH18-202ENST00000412923 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
PCDH18-202ENST00000412923 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
PCDH18-202ENST00000412923 KRTAP5-9P26371 169 aa1.31□□□□□ -2.2
PCDH18-202ENST00000412923 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
PCDH18-202ENST00000412923 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
PCDH18-202ENST00000412923 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
PCDH18-202ENST00000412923 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
PCDH18-202ENST00000412923 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
PCDH18-202ENST00000412923 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
PCDH18-202ENST00000412923 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
PCDH18-202ENST00000412923 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
PCDH18-202ENST00000412923 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
PCDH18-202ENST00000412923 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
PCDH18-202ENST00000412923 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
PCDH18-202ENST00000412923 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
PCDH18-202ENST00000412923 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
PCDH18-202ENST00000412923 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
PCDH18-202ENST00000412923 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 75.6 ms