RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 HSPG2P98160 4391 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 PLAC4Q8WY50 150 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 VPS13BQ7Z7G8 4022 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 KRTAP6-3Q3LI67 103 aa1.05□□□□□ -2.24
HMGB3P2-201ENST00000411913 DYNC1H1Q14204 4646 aaKnown RBP1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 A0A0D9SG42 100 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 SMR3AQ99954 134 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 PRO2289Q9P1D8 64 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.25
HMGB3P2-201ENST00000411913 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 M0QZ58 72 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 UBE2DNLQ8IWF7 75 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 FAT1Q14517 4588 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
HMGB3P2-201ENST00000411913 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P2-201ENST00000411913 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
HMGB3P2-201ENST00000411913 INE1O15225 51 aa1□□□□□ -2.25
HMGB3P2-201ENST00000411913 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
HMGB3P2-201ENST00000411913 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
HMGB3P2-201ENST00000411913 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
HMGB3P2-201ENST00000411913 HMCN2Q8NDA2 5059 aa0.95□□□□□ -2.26
HMGB3P2-201ENST00000411913 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 J3QKU1 62 aa0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 Q5VSD8 79 aa0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 LPAP08519 4548 aa0.92□□□□□ -2.26
HMGB3P2-201ENST00000411913 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
HMGB3P2-201ENST00000411913 MUC17Q685J3 4493 aa0.9□□□□□ -2.27
HMGB3P2-201ENST00000411913 KMT2DO14686 5537 aa0.89□□□□□ -2.27
HMGB3P2-201ENST00000411913 TNP1P09430 55 aa0.89□□□□□ -2.27
HMGB3P2-201ENST00000411913 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
HMGB3P2-201ENST00000411913 LRP2P98164 4655 aa0.88□□□□□ -2.27
HMGB3P2-201ENST00000411913 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
HMGB3P2-201ENST00000411913 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
HMGB3P2-201ENST00000411913 SMR3BP02814 79 aaPredicted RBP0.85□□□□□ -2.27
HMGB3P2-201ENST00000411913 MT1HL1P0DM35 61 aa0.84□□□□□ -2.27
HMGB3P2-201ENST00000411913 USH2AO75445 5202 aa0.84□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
HMGB3P2-201ENST00000411913 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP19-8Q3LI54 63 aa0.77□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT1XP80297 61 aa0.76□□□□□ -2.29
HMGB3P2-201ENST00000411913 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT1BP07438 61 aa0.73□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT2AP02795 61 aa0.71□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1FP04733 61 aa0.71□□□□□ -2.3
HMGB3P2-201ENST00000411913 M0R2T5 61 aa0.7□□□□□ -2.3
HMGB3P2-201ENST00000411913 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1EP04732 61 aa0.68□□□□□ -2.3
HMGB3P2-201ENST00000411913 KRTAP19-7Q3SYF9 63 aa0.68□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1AP04731 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1HP80294 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1LQ93083 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 PRM1P04553 51 aa0.62□□□□□ -2.31
HMGB3P2-201ENST00000411913 MT1GP13640 62 aa0.59□□□□□ -2.31
HMGB3P2-201ENST00000411913 MT1MQ8N339 61 aa0.59□□□□□ -2.31
HMGB3P2-201ENST00000411913 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2AP35326 72 aa0.54□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP19-6Q3LI70 58 aa0.54□□□□□ -2.32
HMGB3P2-201ENST00000411913 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2EP22531 72 aa0.52□□□□□ -2.33
HMGB3P2-201ENST00000411913 SPRR2BP35325 72 aa0.52□□□□□ -2.33
HMGB3P2-201ENST00000411913 SPRR2DP22532 72 aa0.51□□□□□ -2.33
HMGB3P2-201ENST00000411913 MT4P47944 62 aa0.49□□□□□ -2.33
HMGB3P2-201ENST00000411913 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
HMGB3P2-201ENST00000411913 KRTAP20-2Q3LI61 65 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 42.8 ms