RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
HMGB3P2-201ENST00000411913 HSPG2P98160 4391 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 PLAC4Q8WY50 150 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 VPS13BQ7Z7G8 4022 aa1.06□□□□□ -2.24
HMGB3P2-201ENST00000411913 KRTAP6-3Q3LI67 103 aa1.05□□□□□ -2.24
HMGB3P2-201ENST00000411913 DYNC1H1Q14204 4646 aaKnown RBP1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 A0A0D9SG42 100 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 SMR3AQ99954 134 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 PRO2289Q9P1D8 64 aa1.04□□□□□ -2.24
HMGB3P2-201ENST00000411913 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.25
HMGB3P2-201ENST00000411913 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 M0QZ58 72 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 UBE2DNLQ8IWF7 75 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 FAT1Q14517 4588 aa1.02□□□□□ -2.25
HMGB3P2-201ENST00000411913 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
HMGB3P2-201ENST00000411913 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P2-201ENST00000411913 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
HMGB3P2-201ENST00000411913 INE1O15225 51 aa1□□□□□ -2.25
HMGB3P2-201ENST00000411913 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
HMGB3P2-201ENST00000411913 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
HMGB3P2-201ENST00000411913 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
HMGB3P2-201ENST00000411913 HMCN2Q8NDA2 5059 aa0.95□□□□□ -2.26
HMGB3P2-201ENST00000411913 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 J3QKU1 62 aa0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 Q5VSD8 79 aa0.94□□□□□ -2.26
HMGB3P2-201ENST00000411913 LPAP08519 4548 aa0.92□□□□□ -2.26
HMGB3P2-201ENST00000411913 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
HMGB3P2-201ENST00000411913 MUC17Q685J3 4493 aa0.9□□□□□ -2.27
HMGB3P2-201ENST00000411913 KMT2DO14686 5537 aa0.89□□□□□ -2.27
HMGB3P2-201ENST00000411913 TNP1P09430 55 aa0.89□□□□□ -2.27
HMGB3P2-201ENST00000411913 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
HMGB3P2-201ENST00000411913 LRP2P98164 4655 aa0.88□□□□□ -2.27
HMGB3P2-201ENST00000411913 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
HMGB3P2-201ENST00000411913 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
HMGB3P2-201ENST00000411913 SMR3BP02814 79 aaPredicted RBP0.85□□□□□ -2.27
HMGB3P2-201ENST00000411913 MT1HL1P0DM35 61 aa0.84□□□□□ -2.27
HMGB3P2-201ENST00000411913 USH2AO75445 5202 aa0.84□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
HMGB3P2-201ENST00000411913 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
HMGB3P2-201ENST00000411913 KRTAP19-8Q3LI54 63 aa0.77□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT1XP80297 61 aa0.76□□□□□ -2.29
HMGB3P2-201ENST00000411913 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT1BP07438 61 aa0.73□□□□□ -2.29
HMGB3P2-201ENST00000411913 MT2AP02795 61 aa0.71□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1FP04733 61 aa0.71□□□□□ -2.3
HMGB3P2-201ENST00000411913 M0R2T5 61 aa0.7□□□□□ -2.3
HMGB3P2-201ENST00000411913 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1EP04732 61 aa0.68□□□□□ -2.3
HMGB3P2-201ENST00000411913 KRTAP19-7Q3SYF9 63 aa0.68□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1AP04731 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1HP80294 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 MT1LQ93083 61 aa0.67□□□□□ -2.3
HMGB3P2-201ENST00000411913 PRM1P04553 51 aa0.62□□□□□ -2.31
HMGB3P2-201ENST00000411913 MT1GP13640 62 aa0.59□□□□□ -2.31
HMGB3P2-201ENST00000411913 MT1MQ8N339 61 aa0.59□□□□□ -2.31
HMGB3P2-201ENST00000411913 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2AP35326 72 aa0.54□□□□□ -2.32
HMGB3P2-201ENST00000411913 KRTAP19-6Q3LI70 58 aa0.54□□□□□ -2.32
HMGB3P2-201ENST00000411913 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
HMGB3P2-201ENST00000411913 SPRR2EP22531 72 aa0.52□□□□□ -2.33
HMGB3P2-201ENST00000411913 SPRR2BP35325 72 aa0.52□□□□□ -2.33
HMGB3P2-201ENST00000411913 SPRR2DP22532 72 aa0.51□□□□□ -2.33
HMGB3P2-201ENST00000411913 MT4P47944 62 aa0.49□□□□□ -2.33
HMGB3P2-201ENST00000411913 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
HMGB3P2-201ENST00000411913 KRTAP20-2Q3LI61 65 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms