RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SPRR2AP35326 72 aa1.17□□□□□ -2.22
LSM5-206ENST00000409987 SPRR2DP22532 72 aa1.14□□□□□ -2.23
LSM5-206ENST00000409987 SPRR1AP35321 89 aa1.14□□□□□ -2.23
LSM5-206ENST00000409987 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
LSM5-206ENST00000409987 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
LSM5-206ENST00000409987 SPRR1BP22528 89 aa1.13□□□□□ -2.23
LSM5-206ENST00000409987 CLPSL2Q6UWE3 100 aa1.13□□□□□ -2.23
LSM5-206ENST00000409987 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
LSM5-206ENST00000409987 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
LSM5-206ENST00000409987 SPINK1P00995 79 aa1.11□□□□□ -2.23
LSM5-206ENST00000409987 ATXN8Q156A1 80 aa1.11□□□□□ -2.23
LSM5-206ENST00000409987 RPS29P62273 56 aaKnown RBP1.1□□□□□ -2.23
LSM5-206ENST00000409987 FXYD6Q9H0Q3 95 aa1.09□□□□□ -2.23
LSM5-206ENST00000409987 MUC5ACP98088 5654 aa1.09□□□□□ -2.24
LSM5-206ENST00000409987 GNG13Q9P2W3 67 aa1.08□□□□□ -2.24
LSM5-206ENST00000409987 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
LSM5-206ENST00000409987 C9orf92A6NGG3 77 aa1.05□□□□□ -2.24
LSM5-206ENST00000409987 MT1BP07438 61 aa1.03□□□□□ -2.24
LSM5-206ENST00000409987 IAPPP10997 89 aa1.03□□□□□ -2.24
LSM5-206ENST00000409987 S100ZQ8WXG8 99 aa1.03□□□□□ -2.24
LSM5-206ENST00000409987 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
LSM5-206ENST00000409987 KRTAP8-1Q8IUC2 63 aa1.02□□□□□ -2.25
LSM5-206ENST00000409987 NMES1Q9C002 83 aa1.02□□□□□ -2.25
LSM5-206ENST00000409987 C6orf48Q9UBA6 75 aa1.02□□□□□ -2.25
LSM5-206ENST00000409987 CDKN2A-AS1Q9UH64 79 aa1.02□□□□□ -2.25
LSM5-206ENST00000409987 M0QY20 66 aa1.01□□□□□ -2.25
LSM5-206ENST00000409987 NDUFA1O15239 70 aa1.01□□□□□ -2.25
LSM5-206ENST00000409987 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
LSM5-206ENST00000409987 MT4P47944 62 aa1.01□□□□□ -2.25
LSM5-206ENST00000409987 CRIP1P50238 77 aa0.99□□□□□ -2.25
LSM5-206ENST00000409987 PRLHP81277 87 aa0.99□□□□□ -2.25
LSM5-206ENST00000409987 KRTAP19-8Q3LI54 63 aa0.99□□□□□ -2.25
LSM5-206ENST00000409987 UBL5Q9BZL1 73 aa0.97□□□□□ -2.25
LSM5-206ENST00000409987 KCNQ1DNQ9H478 68 aa0.97□□□□□ -2.25
LSM5-206ENST00000409987 SPRR2GQ9BYE4 73 aa0.96□□□□□ -2.26
LSM5-206ENST00000409987 LINC01549A6NIU2 74 aa0.94□□□□□ -2.26
LSM5-206ENST00000409987 WFDC13Q8IUB5 93 aa0.93□□□□□ -2.26
LSM5-206ENST00000409987 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
LSM5-206ENST00000409987 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
LSM5-206ENST00000409987 RPL39LQ96EH5 51 aaKnown RBP0.91□□□□□ -2.26
LSM5-206ENST00000409987 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
LSM5-206ENST00000409987 ETDCA0A1B0GVM5 59 aa0.89□□□□□ -2.27
LSM5-206ENST00000409987 MT1XP80297 61 aa0.89□□□□□ -2.27
LSM5-206ENST00000409987 TMEM167BQ9NRX6 74 aa0.89□□□□□ -2.27
LSM5-206ENST00000409987 LINC00158P58513 81 aa0.88□□□□□ -2.27
LSM5-206ENST00000409987 TOMM7Q9P0U1 55 aa0.88□□□□□ -2.27
LSM5-206ENST00000409987 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
LSM5-206ENST00000409987 FCER1GP30273 86 aa0.87□□□□□ -2.27
LSM5-206ENST00000409987 RPL39P62891 51 aaKnown RBP0.86□□□□□ -2.27
LSM5-206ENST00000409987 SERF2P84101 59 aa0.84□□□□□ -2.27
LSM5-206ENST00000409987 H0YAA0 97 aa0.83□□□□□ -2.28
LSM5-206ENST00000409987 MT1GP13640 62 aa0.83□□□□□ -2.28
LSM5-206ENST00000409987 TOMM5Q8N4H5 51 aa0.83□□□□□ -2.28
LSM5-206ENST00000409987 MT1EP04732 61 aa0.81□□□□□ -2.28
LSM5-206ENST00000409987 KRTAP19-7Q3SYF9 63 aa0.81□□□□□ -2.28
LSM5-206ENST00000409987 IGIPA6NJ69 53 aa0.8□□□□□ -2.28
LSM5-206ENST00000409987 SMIM2Q9BVW6 85 aa0.79□□□□□ -2.28
LSM5-206ENST00000409987 K7EMI3 77 aa0.78□□□□□ -2.28
LSM5-206ENST00000409987 MT1MQ8N339 61 aa0.78□□□□□ -2.28
LSM5-206ENST00000409987 IGLV5-48A0A075B6I7 105 aa0.77□□□□□ -2.29
LSM5-206ENST00000409987 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
LSM5-206ENST00000409987 MT1LQ93083 61 aa0.72□□□□□ -2.29
LSM5-206ENST00000409987 SMIM27A0A1W2PRY6 76 aa0.69□□□□□ -2.3
LSM5-206ENST00000409987 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
LSM5-206ENST00000409987 S4R3F8 94 aa0.69□□□□□ -2.3
LSM5-206ENST00000409987 LINC01546A6NGU7 62 aa0.68□□□□□ -2.3
LSM5-206ENST00000409987 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
LSM5-206ENST00000409987 PRM1P04553 51 aa0.68□□□□□ -2.3
LSM5-206ENST00000409987 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
LSM5-206ENST00000409987 LINC00308Q8TCZ7 52 aa0.63□□□□□ -2.31
LSM5-206ENST00000409987 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
LSM5-206ENST00000409987 M0QZ58 72 aa0.6□□□□□ -2.31
LSM5-206ENST00000409987 MT1AP04731 61 aa0.6□□□□□ -2.31
LSM5-206ENST00000409987 H0YGX0 51 aa0.55□□□□□ -2.32
LSM5-206ENST00000409987 PLNP26678 52 aa0.55□□□□□ -2.32
LSM5-206ENST00000409987 MMP24-AS1A0A0U1RRL7 71 aa0.54□□□□□ -2.32
LSM5-206ENST00000409987 TNP1P09430 55 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 92 ms