RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
LSM5-205ENST00000409952 MT2AP02795 61 aa0.66□□□□□ -2.3
LSM5-205ENST00000409952 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
LSM5-205ENST00000409952 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
LSM5-205ENST00000409952 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
LSM5-205ENST00000409952 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
LSM5-205ENST00000409952 SPART-AS1P0CW21 52 aa0.65□□□□□ -2.31
LSM5-205ENST00000409952 MT1FP04733 61 aa0.64□□□□□ -2.31
LSM5-205ENST00000409952 DEFB106AQ8N104 65 aa0.63□□□□□ -2.31
LSM5-205ENST00000409952 C6orf48Q9UBA6 75 aa0.61□□□□□ -2.31
LSM5-205ENST00000409952 RPS27P42677 84 aaKnown RBP0.59□□□□□ -2.31
LSM5-205ENST00000409952 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
LSM5-205ENST00000409952 RPS27LQ71UM5 84 aaKnown RBP0.59□□□□□ -2.31
LSM5-205ENST00000409952 KAAG1Q9UBP8 84 aa0.58□□□□□ -2.32
LSM5-205ENST00000409952 WT1-ASQ06250 92 aa0.56□□□□□ -2.32
LSM5-205ENST00000409952 H0YGX0 51 aa0.55□□□□□ -2.32
LSM5-205ENST00000409952 TTTY10Q9BZA0 68 aa0.55□□□□□ -2.32
LSM5-205ENST00000409952 TMEM167BQ9NRX6 74 aa0.55□□□□□ -2.32
LSM5-205ENST00000409952 H3BNG1 76 aa0.53□□□□□ -2.32
LSM5-205ENST00000409952 PRLHP81277 87 aa0.53□□□□□ -2.32
LSM5-205ENST00000409952 S4R3F8 94 aa0.53□□□□□ -2.32
LSM5-205ENST00000409952 APELAP0DMC3 54 aa0.52□□□□□ -2.33
LSM5-205ENST00000409952 PLNP26678 52 aa0.52□□□□□ -2.33
LSM5-205ENST00000409952 LINC00308Q8TCZ7 52 aa0.51□□□□□ -2.33
LSM5-205ENST00000409952 H3BUA1 57 aa0.5□□□□□ -2.33
LSM5-205ENST00000409952 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
LSM5-205ENST00000409952 A0A096LPF7 62 aa0.49□□□□□ -2.33
LSM5-205ENST00000409952 SNRPGP15A8MWD9 76 aa0.49□□□□□ -2.33
LSM5-205ENST00000409952 CMC2Q9NRP2 79 aa0.49□□□□□ -2.33
LSM5-205ENST00000409952 DEFB131AP59861 70 aa0.48□□□□□ -2.33
LSM5-205ENST00000409952 LINC01556Q5JQF7 62 aa0.48□□□□□ -2.33
LSM5-205ENST00000409952 LEAP2Q969E1 77 aa0.46□□□□□ -2.34
LSM5-205ENST00000409952 MT1BP07438 61 aa0.45□□□□□ -2.34
LSM5-205ENST00000409952 TIMM8BQ9Y5J9 83 aaPredicted RBP0.45□□□□□ -2.34
LSM5-205ENST00000409952 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
LSM5-205ENST00000409952 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
LSM5-205ENST00000409952 NOP10Q9NPE3 64 aaKnown RBP0.43□□□□□ -2.34
LSM5-205ENST00000409952 HTN1P15515 57 aa0.42□□□□□ -2.34
LSM5-205ENST00000409952 RHPN1-AS1Q9BWJ2 59 aa0.42□□□□□ -2.34
LSM5-205ENST00000409952 TMEM167AQ8TBQ9 72 aa0.41□□□□□ -2.34
LSM5-205ENST00000409952 A0A096LNI7 61 aa0.4□□□□□ -2.35
LSM5-205ENST00000409952 KRTAP19-8Q3LI54 63 aa0.39□□□□□ -2.35
LSM5-205ENST00000409952 MT1GP13640 62 aa0.38□□□□□ -2.35
LSM5-205ENST00000409952 PRCDQ00LT1 54 aa0.37□□□□□ -2.35
LSM5-205ENST00000409952 ABRACLQ9P1F3 81 aa0.37□□□□□ -2.35
LSM5-205ENST00000409952 SMIM27A0A1W2PRY6 76 aa0.35□□□□□ -2.35
LSM5-205ENST00000409952 MT1MQ8N339 61 aa0.35□□□□□ -2.35
LSM5-205ENST00000409952 LINC01546A6NGU7 62 aa0.34□□□□□ -2.36
LSM5-205ENST00000409952 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.36
LSM5-205ENST00000409952 IGLV5-48A0A075B6I7 105 aa0.33□□□□□ -2.36
LSM5-205ENST00000409952 MT1EP04732 61 aa0.32□□□□□ -2.36
LSM5-205ENST00000409952 MT1XP80297 61 aa0.32□□□□□ -2.36
LSM5-205ENST00000409952 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
LSM5-205ENST00000409952 CLPSL2Q6UWE3 100 aa0.3□□□□□ -2.36
LSM5-205ENST00000409952 DEFB1P60022 68 aa0.29□□□□□ -2.36
LSM5-205ENST00000409952 KRTAP19-7Q3SYF9 63 aa0.27□□□□□ -2.37
LSM5-205ENST00000409952 RPL39P5Q59GN2 51 aa0.27□□□□□ -2.37
LSM5-205ENST00000409952 A8MTW9 85 aa0.26□□□□□ -2.37
LSM5-205ENST00000409952 SMIM2Q9BVW6 85 aa0.25□□□□□ -2.37
LSM5-205ENST00000409952 K7EIM0 57 aa0.23□□□□□ -2.37
LSM5-205ENST00000409952 MT1LQ93083 61 aa0.23□□□□□ -2.37
LSM5-205ENST00000409952 SNRPGP62308 76 aaKnown RBP0.21□□□□□ -2.38
LSM5-205ENST00000409952 TOMM5Q8N4H5 51 aa0.21□□□□□ -2.38
LSM5-205ENST00000409952 MMP24-AS1A0A0U1RRL7 71 aa0.2□□□□□ -2.38
LSM5-205ENST00000409952 MT1AP04731 61 aa0.2□□□□□ -2.38
LSM5-205ENST00000409952 KRTAP6-1Q3LI64 71 aa0.2□□□□□ -2.38
LSM5-205ENST00000409952 KRTAP19-5Q3LI72 72 aa0.19□□□□□ -2.38
LSM5-205ENST00000409952 NDUFA1O15239 70 aa0.18□□□□□ -2.38
LSM5-205ENST00000409952 ARHGAP5-AS1Q96IT6 56 aa0.18□□□□□ -2.38
LSM5-205ENST00000409952 M0QY20 66 aa0.17□□□□□ -2.38
LSM5-205ENST00000409952 TNP1P09430 55 aa0.12□□□□□ -2.39
LSM5-205ENST00000409952 M0QZ58 72 aa0.1□□□□□ -2.39
LSM5-205ENST00000409952 LINC01590Q5TEZ4 76 aa0.07□□□□□ -2.4
LSM5-205ENST00000409952 TOMM7Q9P0U1 55 aa0.04□□□□□ -2.4
LSM5-205ENST00000409952 POLR2KP53803 58 aaKnown RBP-0.07□□□□□ -2.42
LSM5-205ENST00000409952 RPL39LQ96EH5 51 aaKnown RBP-0.1□□□□□ -2.43
LSM5-205ENST00000409952 RPL39P62891 51 aaKnown RBP-0.14□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 155.6 ms