RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
PAX3-207ENST00000409551 MT1EP04732 61 aa6.01□□□□□ -1.45
PAX3-207ENST00000409551 SPRR2EP22531 72 aa6.01□□□□□ -1.45
PAX3-207ENST00000409551 SPRR2BP35325 72 aa6.01□□□□□ -1.45
PAX3-207ENST00000409551 SPRR2AP35326 72 aa6.01□□□□□ -1.45
PAX3-207ENST00000409551 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
PAX3-207ENST00000409551 LUZP6Q538Z0 58 aa5.94□□□□□ -1.46
PAX3-207ENST00000409551 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
PAX3-207ENST00000409551 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
PAX3-207ENST00000409551 MT1LQ93083 61 aa5.91□□□□□ -1.46
PAX3-207ENST00000409551 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
PAX3-207ENST00000409551 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
PAX3-207ENST00000409551 SPRR2DP22532 72 aa5.8□□□□□ -1.48
PAX3-207ENST00000409551 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
PAX3-207ENST00000409551 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
PAX3-207ENST00000409551 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
PAX3-207ENST00000409551 MT1GP13640 62 aa5.72□□□□□ -1.49
PAX3-207ENST00000409551 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
PAX3-207ENST00000409551 MT1MQ8N339 61 aa5.65□□□□□ -1.5
PAX3-207ENST00000409551 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
PAX3-207ENST00000409551 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
PAX3-207ENST00000409551 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
PAX3-207ENST00000409551 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
PAX3-207ENST00000409551 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
PAX3-207ENST00000409551 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
PAX3-207ENST00000409551 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
PAX3-207ENST00000409551 H3BS24 57 aa5.49□□□□□ -1.53
PAX3-207ENST00000409551 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
PAX3-207ENST00000409551 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
PAX3-207ENST00000409551 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.57
PAX3-207ENST00000409551 MT4P47944 62 aa5.1□□□□□ -1.59
PAX3-207ENST00000409551 LCE4AQ5TA78 99 aa5.09□□□□□ -1.6
PAX3-207ENST00000409551 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.6
PAX3-207ENST00000409551 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
PAX3-207ENST00000409551 MT1AP04731 61 aa5.04□□□□□ -1.6
PAX3-207ENST00000409551 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
PAX3-207ENST00000409551 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
PAX3-207ENST00000409551 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.61
PAX3-207ENST00000409551 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
PAX3-207ENST00000409551 INE1O15225 51 aa4.91□□□□□ -1.62
PAX3-207ENST00000409551 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
PAX3-207ENST00000409551 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
PAX3-207ENST00000409551 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
PAX3-207ENST00000409551 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
PAX3-207ENST00000409551 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
PAX3-207ENST00000409551 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
PAX3-207ENST00000409551 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
PAX3-207ENST00000409551 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
PAX3-207ENST00000409551 MT3P25713 68 aa4.55□□□□□ -1.68
PAX3-207ENST00000409551 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
PAX3-207ENST00000409551 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
PAX3-207ENST00000409551 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
PAX3-207ENST00000409551 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
PAX3-207ENST00000409551 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
PAX3-207ENST00000409551 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
PAX3-207ENST00000409551 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
PAX3-207ENST00000409551 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PAX3-207ENST00000409551 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
PAX3-207ENST00000409551 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
PAX3-207ENST00000409551 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PAX3-207ENST00000409551 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PAX3-207ENST00000409551 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
PAX3-207ENST00000409551 PRM1P04553 51 aa3.86□□□□□ -1.79
PAX3-207ENST00000409551 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
PAX3-207ENST00000409551 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
PAX3-207ENST00000409551 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
PAX3-207ENST00000409551 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
PAX3-207ENST00000409551 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
PAX3-207ENST00000409551 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
PAX3-207ENST00000409551 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
PAX3-207ENST00000409551 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
PAX3-207ENST00000409551 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
PAX3-207ENST00000409551 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
PAX3-207ENST00000409551 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
PAX3-207ENST00000409551 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PAX3-207ENST00000409551 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
PAX3-207ENST00000409551 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 75.3 ms