RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
SSB-202ENST00000409333 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
SSB-202ENST00000409333 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
SSB-202ENST00000409333 MT1LQ93083 61 aa6.01□□□□□ -1.45
SSB-202ENST00000409333 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
SSB-202ENST00000409333 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
SSB-202ENST00000409333 SPRR2EP22531 72 aa5.96□□□□□ -1.46
SSB-202ENST00000409333 SPRR2BP35325 72 aa5.96□□□□□ -1.46
SSB-202ENST00000409333 SPRR2AP35326 72 aa5.96□□□□□ -1.46
SSB-202ENST00000409333 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.47
SSB-202ENST00000409333 NEBP20929 6669 aa5.89□□□□□ -1.47
SSB-202ENST00000409333 MT1GP13640 62 aa5.88□□□□□ -1.47
SSB-202ENST00000409333 MT1MQ8N339 61 aa5.83□□□□□ -1.48
SSB-202ENST00000409333 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
SSB-202ENST00000409333 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
SSB-202ENST00000409333 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
SSB-202ENST00000409333 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
SSB-202ENST00000409333 SPRR2DP22532 72 aa5.75□□□□□ -1.49
SSB-202ENST00000409333 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
SSB-202ENST00000409333 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
SSB-202ENST00000409333 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
SSB-202ENST00000409333 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
SSB-202ENST00000409333 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.51
SSB-202ENST00000409333 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.51
SSB-202ENST00000409333 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SSB-202ENST00000409333 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
SSB-202ENST00000409333 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
SSB-202ENST00000409333 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
SSB-202ENST00000409333 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
SSB-202ENST00000409333 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
SSB-202ENST00000409333 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SSB-202ENST00000409333 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
SSB-202ENST00000409333 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SSB-202ENST00000409333 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
SSB-202ENST00000409333 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SSB-202ENST00000409333 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
SSB-202ENST00000409333 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SSB-202ENST00000409333 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
SSB-202ENST00000409333 MT1AP04731 61 aa5.11□□□□□ -1.59
SSB-202ENST00000409333 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
SSB-202ENST00000409333 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
SSB-202ENST00000409333 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
SSB-202ENST00000409333 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
SSB-202ENST00000409333 MT4P47944 62 aa5.01□□□□□ -1.61
SSB-202ENST00000409333 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
SSB-202ENST00000409333 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
SSB-202ENST00000409333 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
SSB-202ENST00000409333 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SSB-202ENST00000409333 INE1O15225 51 aa4.8□□□□□ -1.64
SSB-202ENST00000409333 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
SSB-202ENST00000409333 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SSB-202ENST00000409333 MT3P25713 68 aa4.62□□□□□ -1.67
SSB-202ENST00000409333 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
SSB-202ENST00000409333 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
SSB-202ENST00000409333 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
SSB-202ENST00000409333 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
SSB-202ENST00000409333 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
SSB-202ENST00000409333 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
SSB-202ENST00000409333 KRTAP5-8O75690 187 aa4.09□□□□□ -1.76
SSB-202ENST00000409333 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
SSB-202ENST00000409333 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
SSB-202ENST00000409333 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SSB-202ENST00000409333 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
SSB-202ENST00000409333 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
SSB-202ENST00000409333 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
SSB-202ENST00000409333 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
SSB-202ENST00000409333 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SSB-202ENST00000409333 PRM1P04553 51 aa3.55□□□□□ -1.84
SSB-202ENST00000409333 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
SSB-202ENST00000409333 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SSB-202ENST00000409333 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
SSB-202ENST00000409333 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SSB-202ENST00000409333 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SSB-202ENST00000409333 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
SSB-202ENST00000409333 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SSB-202ENST00000409333 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SSB-202ENST00000409333 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 134.5 ms