RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 MT1EP04732 61 aa4.35□□□□□ -1.71
ATG9A-203ENST00000409033 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
ATG9A-203ENST00000409033 MT1LQ93083 61 aa4.33□□□□□ -1.72
ATG9A-203ENST00000409033 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
ATG9A-203ENST00000409033 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
ATG9A-203ENST00000409033 MT1GP13640 62 aa4.29□□□□□ -1.72
ATG9A-203ENST00000409033 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
ATG9A-203ENST00000409033 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
ATG9A-203ENST00000409033 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
ATG9A-203ENST00000409033 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
ATG9A-203ENST00000409033 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.75
ATG9A-203ENST00000409033 MT1MQ8N339 61 aa4.12□□□□□ -1.75
ATG9A-203ENST00000409033 INE1O15225 51 aa4.06□□□□□ -1.76
ATG9A-203ENST00000409033 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
ATG9A-203ENST00000409033 SPRR2EP22531 72 aa4.05□□□□□ -1.76
ATG9A-203ENST00000409033 SPRR2BP35325 72 aa4.05□□□□□ -1.76
ATG9A-203ENST00000409033 SPRR2AP35326 72 aa4.05□□□□□ -1.76
ATG9A-203ENST00000409033 LCE3BQ5TA77 95 aa4.03□□□□□ -1.77
ATG9A-203ENST00000409033 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
ATG9A-203ENST00000409033 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
ATG9A-203ENST00000409033 SPRR2DP22532 72 aa3.87□□□□□ -1.79
ATG9A-203ENST00000409033 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
ATG9A-203ENST00000409033 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
ATG9A-203ENST00000409033 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
ATG9A-203ENST00000409033 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
ATG9A-203ENST00000409033 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
ATG9A-203ENST00000409033 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
ATG9A-203ENST00000409033 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
ATG9A-203ENST00000409033 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
ATG9A-203ENST00000409033 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
ATG9A-203ENST00000409033 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ATG9A-203ENST00000409033 MT1AP04731 61 aa3.61□□□□□ -1.83
ATG9A-203ENST00000409033 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.84
ATG9A-203ENST00000409033 MT4P47944 62 aa3.57□□□□□ -1.84
ATG9A-203ENST00000409033 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
ATG9A-203ENST00000409033 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
ATG9A-203ENST00000409033 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
ATG9A-203ENST00000409033 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
ATG9A-203ENST00000409033 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
ATG9A-203ENST00000409033 MT3P25713 68 aa3.38□□□□□ -1.87
ATG9A-203ENST00000409033 NEBP20929 6669 aa3.37□□□□□ -1.87
ATG9A-203ENST00000409033 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
ATG9A-203ENST00000409033 PRM1P04553 51 aa3.32□□□□□ -1.88
ATG9A-203ENST00000409033 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
ATG9A-203ENST00000409033 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
ATG9A-203ENST00000409033 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
ATG9A-203ENST00000409033 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
ATG9A-203ENST00000409033 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
ATG9A-203ENST00000409033 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
ATG9A-203ENST00000409033 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
ATG9A-203ENST00000409033 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
ATG9A-203ENST00000409033 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
ATG9A-203ENST00000409033 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
ATG9A-203ENST00000409033 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
ATG9A-203ENST00000409033 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
ATG9A-203ENST00000409033 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
ATG9A-203ENST00000409033 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
ATG9A-203ENST00000409033 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
ATG9A-203ENST00000409033 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
ATG9A-203ENST00000409033 LCE1EQ5T753 118 aa2.54□□□□□ -2
ATG9A-203ENST00000409033 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
ATG9A-203ENST00000409033 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
ATG9A-203ENST00000409033 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
ATG9A-203ENST00000409033 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
ATG9A-203ENST00000409033 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
ATG9A-203ENST00000409033 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
ATG9A-203ENST00000409033 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
ATG9A-203ENST00000409033 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
ATG9A-203ENST00000409033 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
ATG9A-203ENST00000409033 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
ATG9A-203ENST00000409033 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
ATG9A-203ENST00000409033 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
ATG9A-203ENST00000409033 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
ATG9A-203ENST00000409033 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
ATG9A-203ENST00000409033 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
ATG9A-203ENST00000409033 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
ATG9A-203ENST00000409033 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
ATG9A-203ENST00000409033 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms