RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
NFIA-208ENST00000407417 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
NFIA-208ENST00000407417 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
NFIA-208ENST00000407417 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
NFIA-208ENST00000407417 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
NFIA-208ENST00000407417 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
NFIA-208ENST00000407417 NEBP20929 6669 aa3.35□□□□□ -1.87
NFIA-208ENST00000407417 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
NFIA-208ENST00000407417 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
NFIA-208ENST00000407417 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
NFIA-208ENST00000407417 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
NFIA-208ENST00000407417 MT1XP80297 61 aa3.28□□□□□ -1.88
NFIA-208ENST00000407417 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
NFIA-208ENST00000407417 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.89
NFIA-208ENST00000407417 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
NFIA-208ENST00000407417 KMT2DO14686 5537 aa3.18□□□□□ -1.9
NFIA-208ENST00000407417 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
NFIA-208ENST00000407417 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
NFIA-208ENST00000407417 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
NFIA-208ENST00000407417 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
NFIA-208ENST00000407417 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
NFIA-208ENST00000407417 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
NFIA-208ENST00000407417 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
NFIA-208ENST00000407417 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
NFIA-208ENST00000407417 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
NFIA-208ENST00000407417 SPRR2EP22531 72 aa3.07□□□□□ -1.92
NFIA-208ENST00000407417 SPRR2BP35325 72 aa3.07□□□□□ -1.92
NFIA-208ENST00000407417 SPRR2AP35326 72 aa3.07□□□□□ -1.92
NFIA-208ENST00000407417 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
NFIA-208ENST00000407417 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
NFIA-208ENST00000407417 SPRR2DP22532 72 aa2.96□□□□□ -1.94
NFIA-208ENST00000407417 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
NFIA-208ENST00000407417 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
NFIA-208ENST00000407417 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
NFIA-208ENST00000407417 MT1EP04732 61 aa2.89□□□□□ -1.95
NFIA-208ENST00000407417 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
NFIA-208ENST00000407417 MT1LQ93083 61 aa2.78□□□□□ -1.96
NFIA-208ENST00000407417 MT1GP13640 62 aa2.77□□□□□ -1.97
NFIA-208ENST00000407417 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
NFIA-208ENST00000407417 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
NFIA-208ENST00000407417 MT1MQ8N339 61 aa2.75□□□□□ -1.97
NFIA-208ENST00000407417 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
NFIA-208ENST00000407417 MT4P47944 62 aa2.6□□□□□ -1.99
NFIA-208ENST00000407417 MT1AP04731 61 aa2.59□□□□□ -2
NFIA-208ENST00000407417 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
NFIA-208ENST00000407417 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
NFIA-208ENST00000407417 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
NFIA-208ENST00000407417 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
NFIA-208ENST00000407417 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
NFIA-208ENST00000407417 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2.01
NFIA-208ENST00000407417 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
NFIA-208ENST00000407417 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
NFIA-208ENST00000407417 PRM1P04553 51 aa2.47□□□□□ -2.01
NFIA-208ENST00000407417 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
NFIA-208ENST00000407417 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
NFIA-208ENST00000407417 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
NFIA-208ENST00000407417 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
NFIA-208ENST00000407417 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
NFIA-208ENST00000407417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
NFIA-208ENST00000407417 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
NFIA-208ENST00000407417 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
NFIA-208ENST00000407417 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
NFIA-208ENST00000407417 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
NFIA-208ENST00000407417 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
NFIA-208ENST00000407417 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
NFIA-208ENST00000407417 MT3P25713 68 aa2.14□□□□□ -2.07
NFIA-208ENST00000407417 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
NFIA-208ENST00000407417 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
NFIA-208ENST00000407417 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
NFIA-208ENST00000407417 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
NFIA-208ENST00000407417 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
NFIA-208ENST00000407417 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
NFIA-208ENST00000407417 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
NFIA-208ENST00000407417 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
NFIA-208ENST00000407417 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
NFIA-208ENST00000407417 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
NFIA-208ENST00000407417 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms