RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
PCNX4-204ENST00000406949 MT1EP04732 61 aa4.09□□□□□ -1.75
PCNX4-204ENST00000406949 MT1LQ93083 61 aa4.09□□□□□ -1.75
PCNX4-204ENST00000406949 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
PCNX4-204ENST00000406949 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
PCNX4-204ENST00000406949 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PCNX4-204ENST00000406949 MT1GP13640 62 aa3.99□□□□□ -1.77
PCNX4-204ENST00000406949 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
PCNX4-204ENST00000406949 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
PCNX4-204ENST00000406949 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
PCNX4-204ENST00000406949 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
PCNX4-204ENST00000406949 MT1MQ8N339 61 aa3.86□□□□□ -1.79
PCNX4-204ENST00000406949 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
PCNX4-204ENST00000406949 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
PCNX4-204ENST00000406949 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
PCNX4-204ENST00000406949 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
PCNX4-204ENST00000406949 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
PCNX4-204ENST00000406949 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
PCNX4-204ENST00000406949 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
PCNX4-204ENST00000406949 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
PCNX4-204ENST00000406949 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
PCNX4-204ENST00000406949 SPRR2EP22531 72 aa3.62□□□□□ -1.83
PCNX4-204ENST00000406949 SPRR2BP35325 72 aa3.62□□□□□ -1.83
PCNX4-204ENST00000406949 SPRR2AP35326 72 aa3.62□□□□□ -1.83
PCNX4-204ENST00000406949 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
PCNX4-204ENST00000406949 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
PCNX4-204ENST00000406949 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
PCNX4-204ENST00000406949 SPRR2DP22532 72 aa3.46□□□□□ -1.86
PCNX4-204ENST00000406949 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
PCNX4-204ENST00000406949 MT1AP04731 61 aa3.44□□□□□ -1.86
PCNX4-204ENST00000406949 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PCNX4-204ENST00000406949 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.86
PCNX4-204ENST00000406949 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
PCNX4-204ENST00000406949 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
PCNX4-204ENST00000406949 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
PCNX4-204ENST00000406949 PRM1P04553 51 aa3.36□□□□□ -1.87
PCNX4-204ENST00000406949 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
PCNX4-204ENST00000406949 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
PCNX4-204ENST00000406949 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
PCNX4-204ENST00000406949 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
PCNX4-204ENST00000406949 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
PCNX4-204ENST00000406949 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
PCNX4-204ENST00000406949 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
PCNX4-204ENST00000406949 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
PCNX4-204ENST00000406949 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
PCNX4-204ENST00000406949 MT4P47944 62 aa3.22□□□□□ -1.89
PCNX4-204ENST00000406949 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
PCNX4-204ENST00000406949 MT3P25713 68 aa3.19□□□□□ -1.9
PCNX4-204ENST00000406949 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
PCNX4-204ENST00000406949 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
PCNX4-204ENST00000406949 NEBP20929 6669 aa2.99□□□□□ -1.93
PCNX4-204ENST00000406949 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
PCNX4-204ENST00000406949 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
PCNX4-204ENST00000406949 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PCNX4-204ENST00000406949 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
PCNX4-204ENST00000406949 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
PCNX4-204ENST00000406949 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
PCNX4-204ENST00000406949 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PCNX4-204ENST00000406949 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
PCNX4-204ENST00000406949 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
PCNX4-204ENST00000406949 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
PCNX4-204ENST00000406949 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
PCNX4-204ENST00000406949 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
PCNX4-204ENST00000406949 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
PCNX4-204ENST00000406949 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
PCNX4-204ENST00000406949 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
PCNX4-204ENST00000406949 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PCNX4-204ENST00000406949 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PCNX4-204ENST00000406949 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
PCNX4-204ENST00000406949 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
PCNX4-204ENST00000406949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
PCNX4-204ENST00000406949 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
PCNX4-204ENST00000406949 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
PCNX4-204ENST00000406949 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
PCNX4-204ENST00000406949 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
PCNX4-204ENST00000406949 PHGR1C9JFL3 82 aa1.71□□□□□ -2.13
PCNX4-204ENST00000406949 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 117.1 ms