RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.69
PSME4-202ENST00000404125 MT1LQ93083 61 aa4.43□□□□□ -1.7
PSME4-202ENST00000404125 MT1EP04732 61 aa4.42□□□□□ -1.7
PSME4-202ENST00000404125 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
PSME4-202ENST00000404125 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
PSME4-202ENST00000404125 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
PSME4-202ENST00000404125 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
PSME4-202ENST00000404125 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
PSME4-202ENST00000404125 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
PSME4-202ENST00000404125 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PSME4-202ENST00000404125 MT1MQ8N339 61 aa4.3□□□□□ -1.72
PSME4-202ENST00000404125 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
PSME4-202ENST00000404125 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
PSME4-202ENST00000404125 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
PSME4-202ENST00000404125 KMT2DO14686 5537 aa4.2□□□□□ -1.74
PSME4-202ENST00000404125 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
PSME4-202ENST00000404125 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
PSME4-202ENST00000404125 PRM1P04553 51 aa4.11□□□□□ -1.75
PSME4-202ENST00000404125 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.76
PSME4-202ENST00000404125 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
PSME4-202ENST00000404125 MT3P25713 68 aa4.01□□□□□ -1.77
PSME4-202ENST00000404125 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
PSME4-202ENST00000404125 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
PSME4-202ENST00000404125 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
PSME4-202ENST00000404125 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
PSME4-202ENST00000404125 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
PSME4-202ENST00000404125 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.78
PSME4-202ENST00000404125 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
PSME4-202ENST00000404125 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
PSME4-202ENST00000404125 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
PSME4-202ENST00000404125 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
PSME4-202ENST00000404125 MT1AP04731 61 aa3.79□□□□□ -1.8
PSME4-202ENST00000404125 USH2AO75445 5202 aa3.79□□□□□ -1.8
PSME4-202ENST00000404125 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
PSME4-202ENST00000404125 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
PSME4-202ENST00000404125 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
PSME4-202ENST00000404125 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
PSME4-202ENST00000404125 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
PSME4-202ENST00000404125 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PSME4-202ENST00000404125 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PSME4-202ENST00000404125 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
PSME4-202ENST00000404125 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PSME4-202ENST00000404125 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
PSME4-202ENST00000404125 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
PSME4-202ENST00000404125 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
PSME4-202ENST00000404125 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
PSME4-202ENST00000404125 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
PSME4-202ENST00000404125 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
PSME4-202ENST00000404125 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
PSME4-202ENST00000404125 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
PSME4-202ENST00000404125 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
PSME4-202ENST00000404125 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
PSME4-202ENST00000404125 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
PSME4-202ENST00000404125 NEBP20929 6669 aa3.14□□□□□ -1.91
PSME4-202ENST00000404125 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
PSME4-202ENST00000404125 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
PSME4-202ENST00000404125 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
PSME4-202ENST00000404125 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PSME4-202ENST00000404125 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
PSME4-202ENST00000404125 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
PSME4-202ENST00000404125 MUC5ACP98088 5654 aa2.58□□□□□ -2
PSME4-202ENST00000404125 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
PSME4-202ENST00000404125 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
PSME4-202ENST00000404125 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
PSME4-202ENST00000404125 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
PSME4-202ENST00000404125 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
PSME4-202ENST00000404125 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
PSME4-202ENST00000404125 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
PSME4-202ENST00000404125 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
PSME4-202ENST00000404125 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
PSME4-202ENST00000404125 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
PSME4-202ENST00000404125 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.09
PSME4-202ENST00000404125 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
PSME4-202ENST00000404125 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PSME4-202ENST00000404125 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
PSME4-202ENST00000404125 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
PSME4-202ENST00000404125 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms