RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 MT1LQ93083 61 aa4.34□□□□□ -1.71
RERE-204ENST00000400908 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
RERE-204ENST00000400908 MT1EP04732 61 aa4.34□□□□□ -1.71
RERE-204ENST00000400908 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
RERE-204ENST00000400908 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
RERE-204ENST00000400908 MUC2Q02817 5179 aa4.26□□□□□ -1.73
RERE-204ENST00000400908 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
RERE-204ENST00000400908 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
RERE-204ENST00000400908 MT4P47944 62 aa4.2□□□□□ -1.74
RERE-204ENST00000400908 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
RERE-204ENST00000400908 MT1MQ8N339 61 aa4.17□□□□□ -1.74
RERE-204ENST00000400908 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
RERE-204ENST00000400908 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
RERE-204ENST00000400908 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
RERE-204ENST00000400908 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
RERE-204ENST00000400908 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
RERE-204ENST00000400908 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
RERE-204ENST00000400908 MT1AP04731 61 aa3.92□□□□□ -1.78
RERE-204ENST00000400908 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
RERE-204ENST00000400908 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
RERE-204ENST00000400908 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
RERE-204ENST00000400908 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
RERE-204ENST00000400908 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
RERE-204ENST00000400908 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
RERE-204ENST00000400908 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
RERE-204ENST00000400908 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
RERE-204ENST00000400908 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
RERE-204ENST00000400908 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
RERE-204ENST00000400908 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
RERE-204ENST00000400908 USH2AO75445 5202 aa3.75□□□□□ -1.81
RERE-204ENST00000400908 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
RERE-204ENST00000400908 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
RERE-204ENST00000400908 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
RERE-204ENST00000400908 KMT2DO14686 5537 aa3.65□□□□□ -1.82
RERE-204ENST00000400908 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
RERE-204ENST00000400908 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.83
RERE-204ENST00000400908 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
RERE-204ENST00000400908 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
RERE-204ENST00000400908 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
RERE-204ENST00000400908 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
RERE-204ENST00000400908 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
RERE-204ENST00000400908 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
RERE-204ENST00000400908 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
RERE-204ENST00000400908 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
RERE-204ENST00000400908 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
RERE-204ENST00000400908 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
RERE-204ENST00000400908 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
RERE-204ENST00000400908 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
RERE-204ENST00000400908 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
RERE-204ENST00000400908 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
RERE-204ENST00000400908 NEBP20929 6669 aa3.1□□□□□ -1.91
RERE-204ENST00000400908 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
RERE-204ENST00000400908 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
RERE-204ENST00000400908 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
RERE-204ENST00000400908 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
RERE-204ENST00000400908 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
RERE-204ENST00000400908 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
RERE-204ENST00000400908 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
RERE-204ENST00000400908 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
RERE-204ENST00000400908 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
RERE-204ENST00000400908 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
RERE-204ENST00000400908 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
RERE-204ENST00000400908 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
RERE-204ENST00000400908 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
RERE-204ENST00000400908 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
RERE-204ENST00000400908 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
RERE-204ENST00000400908 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
RERE-204ENST00000400908 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
RERE-204ENST00000400908 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
RERE-204ENST00000400908 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
RERE-204ENST00000400908 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
RERE-204ENST00000400908 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
RERE-204ENST00000400908 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
RERE-204ENST00000400908 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
RERE-204ENST00000400908 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
RERE-204ENST00000400908 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
RERE-204ENST00000400908 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 95 ms