RNA–Protein interactions for RNA: ENST00000400050.7

MTCL1-203, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MTCL1, Length 6,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-203ENST00000400050 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
MTCL1-203ENST00000400050 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
MTCL1-203ENST00000400050 RNF213Q63HN8 5207 aa4.71□□□□□ -1.66
MTCL1-203ENST00000400050 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
MTCL1-203ENST00000400050 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
MTCL1-203ENST00000400050 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
MTCL1-203ENST00000400050 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
MTCL1-203ENST00000400050 MT1AP04731 61 aa4.67□□□□□ -1.66
MTCL1-203ENST00000400050 FAT4Q6V0I7 4981 aa4.67□□□□□ -1.66
MTCL1-203ENST00000400050 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
MTCL1-203ENST00000400050 PRM1P04553 51 aa4.65□□□□□ -1.67
MTCL1-203ENST00000400050 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
MTCL1-203ENST00000400050 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
MTCL1-203ENST00000400050 MUC2Q02817 5179 aa4.53□□□□□ -1.68
MTCL1-203ENST00000400050 MT4P47944 62 aa4.5□□□□□ -1.69
MTCL1-203ENST00000400050 UBR4Q5T4S7 5183 aa4.48□□□□□ -1.69
MTCL1-203ENST00000400050 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
MTCL1-203ENST00000400050 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
MTCL1-203ENST00000400050 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
MTCL1-203ENST00000400050 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
MTCL1-203ENST00000400050 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
MTCL1-203ENST00000400050 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
MTCL1-203ENST00000400050 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
MTCL1-203ENST00000400050 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
MTCL1-203ENST00000400050 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
MTCL1-203ENST00000400050 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
MTCL1-203ENST00000400050 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
MTCL1-203ENST00000400050 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
MTCL1-203ENST00000400050 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
MTCL1-203ENST00000400050 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
MTCL1-203ENST00000400050 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
MTCL1-203ENST00000400050 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
MTCL1-203ENST00000400050 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
MTCL1-203ENST00000400050 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
MTCL1-203ENST00000400050 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
MTCL1-203ENST00000400050 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
MTCL1-203ENST00000400050 USH2AO75445 5202 aa3.92□□□□□ -1.78
MTCL1-203ENST00000400050 KMT2DO14686 5537 aa3.92□□□□□ -1.78
MTCL1-203ENST00000400050 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
MTCL1-203ENST00000400050 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
MTCL1-203ENST00000400050 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
MTCL1-203ENST00000400050 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
MTCL1-203ENST00000400050 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.82
MTCL1-203ENST00000400050 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
MTCL1-203ENST00000400050 SSPOA2VEC9 5147 aa3.59□□□□□ -1.84
MTCL1-203ENST00000400050 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
MTCL1-203ENST00000400050 NEBP20929 6669 aa3.51□□□□□ -1.85
MTCL1-203ENST00000400050 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
MTCL1-203ENST00000400050 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
MTCL1-203ENST00000400050 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
MTCL1-203ENST00000400050 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
MTCL1-203ENST00000400050 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
MTCL1-203ENST00000400050 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
MTCL1-203ENST00000400050 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
MTCL1-203ENST00000400050 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
MTCL1-203ENST00000400050 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
MTCL1-203ENST00000400050 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
MTCL1-203ENST00000400050 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
MTCL1-203ENST00000400050 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
MTCL1-203ENST00000400050 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
MTCL1-203ENST00000400050 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
MTCL1-203ENST00000400050 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
MTCL1-203ENST00000400050 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
MTCL1-203ENST00000400050 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
MTCL1-203ENST00000400050 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
MTCL1-203ENST00000400050 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
MTCL1-203ENST00000400050 KRTAP5-8O75690 187 aa2.53□□□□□ -2
MTCL1-203ENST00000400050 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
MTCL1-203ENST00000400050 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
MTCL1-203ENST00000400050 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
MTCL1-203ENST00000400050 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
MTCL1-203ENST00000400050 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
MTCL1-203ENST00000400050 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
MTCL1-203ENST00000400050 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
MTCL1-203ENST00000400050 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
MTCL1-203ENST00000400050 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
MTCL1-203ENST00000400050 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 125.1 ms