RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NEBP20929 6669 aa5.9□□□□□ -1.47
TNRC18-202ENST00000399434 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
TNRC18-202ENST00000399434 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
TNRC18-202ENST00000399434 MT1LQ93083 61 aa5.82□□□□□ -1.48
TNRC18-202ENST00000399434 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
TNRC18-202ENST00000399434 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
TNRC18-202ENST00000399434 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
TNRC18-202ENST00000399434 SPRR2EP22531 72 aa5.73□□□□□ -1.49
TNRC18-202ENST00000399434 SPRR2BP35325 72 aa5.73□□□□□ -1.49
TNRC18-202ENST00000399434 SPRR2AP35326 72 aa5.73□□□□□ -1.49
TNRC18-202ENST00000399434 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
TNRC18-202ENST00000399434 MT1GP13640 62 aa5.65□□□□□ -1.5
TNRC18-202ENST00000399434 MT1MQ8N339 61 aa5.64□□□□□ -1.51
TNRC18-202ENST00000399434 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
TNRC18-202ENST00000399434 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
TNRC18-202ENST00000399434 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
TNRC18-202ENST00000399434 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
TNRC18-202ENST00000399434 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
TNRC18-202ENST00000399434 SPRR2DP22532 72 aa5.52□□□□□ -1.53
TNRC18-202ENST00000399434 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
TNRC18-202ENST00000399434 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
TNRC18-202ENST00000399434 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
TNRC18-202ENST00000399434 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
TNRC18-202ENST00000399434 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
TNRC18-202ENST00000399434 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
TNRC18-202ENST00000399434 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
TNRC18-202ENST00000399434 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
TNRC18-202ENST00000399434 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
TNRC18-202ENST00000399434 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
TNRC18-202ENST00000399434 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
TNRC18-202ENST00000399434 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
TNRC18-202ENST00000399434 MT1AP04731 61 aa4.94□□□□□ -1.62
TNRC18-202ENST00000399434 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
TNRC18-202ENST00000399434 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
TNRC18-202ENST00000399434 LUZP6Q538Z0 58 aa4.9□□□□□ -1.62
TNRC18-202ENST00000399434 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
TNRC18-202ENST00000399434 MT4P47944 62 aa4.81□□□□□ -1.64
TNRC18-202ENST00000399434 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
TNRC18-202ENST00000399434 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
TNRC18-202ENST00000399434 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
TNRC18-202ENST00000399434 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
TNRC18-202ENST00000399434 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
TNRC18-202ENST00000399434 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
TNRC18-202ENST00000399434 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
TNRC18-202ENST00000399434 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
TNRC18-202ENST00000399434 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
TNRC18-202ENST00000399434 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
TNRC18-202ENST00000399434 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
TNRC18-202ENST00000399434 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
TNRC18-202ENST00000399434 MT3P25713 68 aa4.43□□□□□ -1.7
TNRC18-202ENST00000399434 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
TNRC18-202ENST00000399434 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
TNRC18-202ENST00000399434 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
TNRC18-202ENST00000399434 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
TNRC18-202ENST00000399434 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
TNRC18-202ENST00000399434 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
TNRC18-202ENST00000399434 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
TNRC18-202ENST00000399434 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TNRC18-202ENST00000399434 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
TNRC18-202ENST00000399434 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
TNRC18-202ENST00000399434 INE1O15225 51 aa3.83□□□□□ -1.8
TNRC18-202ENST00000399434 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
TNRC18-202ENST00000399434 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
TNRC18-202ENST00000399434 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
TNRC18-202ENST00000399434 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
TNRC18-202ENST00000399434 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
TNRC18-202ENST00000399434 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
TNRC18-202ENST00000399434 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
TNRC18-202ENST00000399434 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
TNRC18-202ENST00000399434 PRM1P04553 51 aa3.39□□□□□ -1.87
TNRC18-202ENST00000399434 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
TNRC18-202ENST00000399434 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
TNRC18-202ENST00000399434 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TNRC18-202ENST00000399434 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
TNRC18-202ENST00000399434 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TNRC18-202ENST00000399434 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
TNRC18-202ENST00000399434 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 95.3 ms