RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 MT4P47944 62 aa4.78□□□□□ -1.64
ITSN1-209ENST00000399352 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ITSN1-209ENST00000399352 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
ITSN1-209ENST00000399352 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
ITSN1-209ENST00000399352 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
ITSN1-209ENST00000399352 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
ITSN1-209ENST00000399352 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
ITSN1-209ENST00000399352 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
ITSN1-209ENST00000399352 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
ITSN1-209ENST00000399352 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
ITSN1-209ENST00000399352 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
ITSN1-209ENST00000399352 MT1AP04731 61 aa4.58□□□□□ -1.68
ITSN1-209ENST00000399352 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
ITSN1-209ENST00000399352 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
ITSN1-209ENST00000399352 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
ITSN1-209ENST00000399352 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
ITSN1-209ENST00000399352 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
ITSN1-209ENST00000399352 MUC2Q02817 5179 aa4.43□□□□□ -1.7
ITSN1-209ENST00000399352 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
ITSN1-209ENST00000399352 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
ITSN1-209ENST00000399352 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
ITSN1-209ENST00000399352 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
ITSN1-209ENST00000399352 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
ITSN1-209ENST00000399352 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
ITSN1-209ENST00000399352 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
ITSN1-209ENST00000399352 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
ITSN1-209ENST00000399352 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
ITSN1-209ENST00000399352 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
ITSN1-209ENST00000399352 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
ITSN1-209ENST00000399352 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
ITSN1-209ENST00000399352 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
ITSN1-209ENST00000399352 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
ITSN1-209ENST00000399352 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
ITSN1-209ENST00000399352 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
ITSN1-209ENST00000399352 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
ITSN1-209ENST00000399352 USH2AO75445 5202 aa4.02□□□□□ -1.77
ITSN1-209ENST00000399352 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
ITSN1-209ENST00000399352 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
ITSN1-209ENST00000399352 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
ITSN1-209ENST00000399352 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
ITSN1-209ENST00000399352 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
ITSN1-209ENST00000399352 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
ITSN1-209ENST00000399352 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
ITSN1-209ENST00000399352 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
ITSN1-209ENST00000399352 KMT2DO14686 5537 aa3.72□□□□□ -1.81
ITSN1-209ENST00000399352 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
ITSN1-209ENST00000399352 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
ITSN1-209ENST00000399352 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
ITSN1-209ENST00000399352 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
ITSN1-209ENST00000399352 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
ITSN1-209ENST00000399352 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
ITSN1-209ENST00000399352 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
ITSN1-209ENST00000399352 NEBP20929 6669 aa3.36□□□□□ -1.87
ITSN1-209ENST00000399352 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
ITSN1-209ENST00000399352 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
ITSN1-209ENST00000399352 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
ITSN1-209ENST00000399352 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
ITSN1-209ENST00000399352 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
ITSN1-209ENST00000399352 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
ITSN1-209ENST00000399352 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
ITSN1-209ENST00000399352 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
ITSN1-209ENST00000399352 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
ITSN1-209ENST00000399352 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
ITSN1-209ENST00000399352 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
ITSN1-209ENST00000399352 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
ITSN1-209ENST00000399352 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
ITSN1-209ENST00000399352 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ITSN1-209ENST00000399352 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
ITSN1-209ENST00000399352 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
ITSN1-209ENST00000399352 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
ITSN1-209ENST00000399352 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
ITSN1-209ENST00000399352 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
ITSN1-209ENST00000399352 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
ITSN1-209ENST00000399352 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
ITSN1-209ENST00000399352 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
ITSN1-209ENST00000399352 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
ITSN1-209ENST00000399352 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 72 ms