RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MT1EP04732 61 aa9.39□□□□□ -0.91
TMEM55B-202ENST00000398020 KRTAP20-1Q3LI63 56 aa9.3□□□□□ -0.92
TMEM55B-202ENST00000398020 SPRR2DP22532 72 aa9.29□□□□□ -0.92
TMEM55B-202ENST00000398020 KRTAP19-3Q7Z4W3 81 aa9.2□□□□□ -0.94
TMEM55B-202ENST00000398020 KRTAP2-3P0C7H8 128 aa9.18□□□□□ -0.94
TMEM55B-202ENST00000398020 KRTAP2-4Q9BYR9 128 aa9.18□□□□□ -0.94
TMEM55B-202ENST00000398020 LCE5AQ5TCM9 118 aa9.15□□□□□ -0.94
TMEM55B-202ENST00000398020 KRTAP12-3P60328 96 aa9.08□□□□□ -0.96
TMEM55B-202ENST00000398020 MT1LQ93083 61 aa9.07□□□□□ -0.96
TMEM55B-202ENST00000398020 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
TMEM55B-202ENST00000398020 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
TMEM55B-202ENST00000398020 MT1GP13640 62 aa9.01□□□□□ -0.97
TMEM55B-202ENST00000398020 LCE3BQ5TA77 95 aa9□□□□□ -0.97
TMEM55B-202ENST00000398020 DSTQ03001 7570 aaKnown RBP8.94□□□□□ -0.98
TMEM55B-202ENST00000398020 KRTAP2-2Q9BYT5 123 aa8.92□□□□□ -0.98
TMEM55B-202ENST00000398020 KRTAP2-1Q9BYU5 128 aa8.92□□□□□ -0.98
TMEM55B-202ENST00000398020 MT1MQ8N339 61 aa8.91□□□□□ -0.98
TMEM55B-202ENST00000398020 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
TMEM55B-202ENST00000398020 KRTAP4-7Q9BYR0 210 aa8.72□□□□□ -1.01
TMEM55B-202ENST00000398020 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
TMEM55B-202ENST00000398020 KRTAP19-4Q3LI73 84 aa8.45□□□□□ -1.06
TMEM55B-202ENST00000398020 LCE3CQ5T5A8 94 aa8.41□□□□□ -1.06
TMEM55B-202ENST00000398020 KRTAP4-9Q9BYQ8 210 aa8.29□□□□□ -1.08
TMEM55B-202ENST00000398020 H3BS24 57 aa8.28□□□□□ -1.08
TMEM55B-202ENST00000398020 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
TMEM55B-202ENST00000398020 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
TMEM55B-202ENST00000398020 KRTAP5-4Q6L8H1 288 aa8.15□□□□□ -1.1
TMEM55B-202ENST00000398020 MT4P47944 62 aa8.13□□□□□ -1.11
TMEM55B-202ENST00000398020 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
TMEM55B-202ENST00000398020 SPRR5A0A1B0GTR4 108 aa8.1□□□□□ -1.11
TMEM55B-202ENST00000398020 KRTAP5-5Q701N2 237 aaPredicted RBP8.1□□□□□ -1.11
TMEM55B-202ENST00000398020 HMCN1Q96RW7 5635 aa8.04□□□□□ -1.12
TMEM55B-202ENST00000398020 KRTAP9-6A8MVA2 160 aa7.96□□□□□ -1.13
TMEM55B-202ENST00000398020 KRTAP4-6Q9BYQ5 205 aa7.95□□□□□ -1.14
TMEM55B-202ENST00000398020 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
TMEM55B-202ENST00000398020 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
TMEM55B-202ENST00000398020 KRTAP12-4P60329 112 aa7.75□□□□□ -1.17
TMEM55B-202ENST00000398020 SYNE1Q8NF91 8797 aaKnown RBP7.74□□□□□ -1.17
TMEM55B-202ENST00000398020 MT1AP04731 61 aa7.7□□□□□ -1.18
TMEM55B-202ENST00000398020 KRTAP20-2Q3LI61 65 aa7.7□□□□□ -1.18
TMEM55B-202ENST00000398020 KRTAP6-1Q3LI64 71 aa7.67□□□□□ -1.18
TMEM55B-202ENST00000398020 GPR98Q8WXG9 6306 aa7.53□□□□□ -1.2
TMEM55B-202ENST00000398020 AHNAK2Q8IVF2 5795 aa7.51□□□□□ -1.21
TMEM55B-202ENST00000398020 KRTAP5-3Q6L8H2 238 aa7.44□□□□□ -1.22
TMEM55B-202ENST00000398020 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
TMEM55B-202ENST00000398020 KRTAP5-10Q6L8G5 202 aa7.25□□□□□ -1.25
TMEM55B-202ENST00000398020 KRTAP6-2Q3LI66 62 aa7.23□□□□□ -1.25
TMEM55B-202ENST00000398020 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
TMEM55B-202ENST00000398020 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
TMEM55B-202ENST00000398020 MT3P25713 68 aa7.01□□□□□ -1.29
TMEM55B-202ENST00000398020 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
TMEM55B-202ENST00000398020 KRTAP5-7Q6L8G8 165 aa6.87□□□□□ -1.31
TMEM55B-202ENST00000398020 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
TMEM55B-202ENST00000398020 KRTAP5-8O75690 187 aa6.65□□□□□ -1.34
TMEM55B-202ENST00000398020 INE1O15225 51 aa6.47□□□□□ -1.37
TMEM55B-202ENST00000398020 KRTAP5-1Q6L8H4 278 aa6.42□□□□□ -1.38
TMEM55B-202ENST00000398020 LCE1EQ5T753 118 aa6.28□□□□□ -1.4
TMEM55B-202ENST00000398020 MUC5ACP98088 5654 aa6.27□□□□□ -1.4
TMEM55B-202ENST00000398020 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
TMEM55B-202ENST00000398020 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
TMEM55B-202ENST00000398020 MUC5BQ9HC84 5762 aaPredicted RBP6.14□□□□□ -1.43
TMEM55B-202ENST00000398020 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
TMEM55B-202ENST00000398020 LCE1BQ5T7P3 118 aa5.97□□□□□ -1.45
TMEM55B-202ENST00000398020 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
TMEM55B-202ENST00000398020 LCE3EQ5T5B0 92 aa5.87□□□□□ -1.47
TMEM55B-202ENST00000398020 LCE1CQ5T751 118 aa5.85□□□□□ -1.47
TMEM55B-202ENST00000398020 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.37□□□□□ -1.55
TMEM55B-202ENST00000398020 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
TMEM55B-202ENST00000398020 KRTAP5-11Q6L8G4 156 aa5.24□□□□□ -1.57
TMEM55B-202ENST00000398020 PRM1P04553 51 aa5.13□□□□□ -1.59
TMEM55B-202ENST00000398020 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
TMEM55B-202ENST00000398020 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
TMEM55B-202ENST00000398020 KRTAP4-4Q9BYR3 166 aa4.6□□□□□ -1.67
TMEM55B-202ENST00000398020 PHGR1C9JFL3 82 aa4.53□□□□□ -1.68
TMEM55B-202ENST00000398020 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
TMEM55B-202ENST00000398020 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
TMEM55B-202ENST00000398020 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 60.7 ms