RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
CHL1-202ENST00000397491 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
CHL1-202ENST00000397491 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
CHL1-202ENST00000397491 MUC2Q02817 5179 aa4.61□□□□□ -1.67
CHL1-202ENST00000397491 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
CHL1-202ENST00000397491 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CHL1-202ENST00000397491 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CHL1-202ENST00000397491 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CHL1-202ENST00000397491 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
CHL1-202ENST00000397491 MT1MQ8N339 61 aa4.54□□□□□ -1.68
CHL1-202ENST00000397491 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
CHL1-202ENST00000397491 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CHL1-202ENST00000397491 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
CHL1-202ENST00000397491 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
CHL1-202ENST00000397491 MT3P25713 68 aa4.43□□□□□ -1.7
CHL1-202ENST00000397491 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
CHL1-202ENST00000397491 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
CHL1-202ENST00000397491 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
CHL1-202ENST00000397491 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
CHL1-202ENST00000397491 MT4P47944 62 aa4.33□□□□□ -1.72
CHL1-202ENST00000397491 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
CHL1-202ENST00000397491 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
CHL1-202ENST00000397491 MT1AP04731 61 aa4.24□□□□□ -1.73
CHL1-202ENST00000397491 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
CHL1-202ENST00000397491 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
CHL1-202ENST00000397491 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
CHL1-202ENST00000397491 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
CHL1-202ENST00000397491 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.74
CHL1-202ENST00000397491 USH2AO75445 5202 aa4.13□□□□□ -1.75
CHL1-202ENST00000397491 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
CHL1-202ENST00000397491 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
CHL1-202ENST00000397491 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
CHL1-202ENST00000397491 KMT2DO14686 5537 aa4.05□□□□□ -1.76
CHL1-202ENST00000397491 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
CHL1-202ENST00000397491 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
CHL1-202ENST00000397491 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
CHL1-202ENST00000397491 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
CHL1-202ENST00000397491 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
CHL1-202ENST00000397491 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CHL1-202ENST00000397491 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
CHL1-202ENST00000397491 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
CHL1-202ENST00000397491 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
CHL1-202ENST00000397491 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CHL1-202ENST00000397491 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
CHL1-202ENST00000397491 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
CHL1-202ENST00000397491 NEBP20929 6669 aa3.55□□□□□ -1.84
CHL1-202ENST00000397491 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CHL1-202ENST00000397491 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
CHL1-202ENST00000397491 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
CHL1-202ENST00000397491 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
CHL1-202ENST00000397491 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CHL1-202ENST00000397491 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
CHL1-202ENST00000397491 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
CHL1-202ENST00000397491 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
CHL1-202ENST00000397491 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CHL1-202ENST00000397491 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
CHL1-202ENST00000397491 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CHL1-202ENST00000397491 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
CHL1-202ENST00000397491 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
CHL1-202ENST00000397491 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
CHL1-202ENST00000397491 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
CHL1-202ENST00000397491 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CHL1-202ENST00000397491 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
CHL1-202ENST00000397491 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
CHL1-202ENST00000397491 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
CHL1-202ENST00000397491 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
CHL1-202ENST00000397491 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
CHL1-202ENST00000397491 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CHL1-202ENST00000397491 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CHL1-202ENST00000397491 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
CHL1-202ENST00000397491 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
CHL1-202ENST00000397491 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CHL1-202ENST00000397491 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
CHL1-202ENST00000397491 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CHL1-202ENST00000397491 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
CHL1-202ENST00000397491 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
CHL1-202ENST00000397491 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 233.2 ms