RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SPRR2EP22531 72 aa3.91□□□□□ -1.78
IFT140-202ENST00000397417 SPRR2BP35325 72 aa3.91□□□□□ -1.78
IFT140-202ENST00000397417 SPRR2AP35326 72 aa3.91□□□□□ -1.78
IFT140-202ENST00000397417 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
IFT140-202ENST00000397417 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
IFT140-202ENST00000397417 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
IFT140-202ENST00000397417 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
IFT140-202ENST00000397417 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
IFT140-202ENST00000397417 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
IFT140-202ENST00000397417 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
IFT140-202ENST00000397417 MT1EP04732 61 aa3.75□□□□□ -1.81
IFT140-202ENST00000397417 MT1LQ93083 61 aa3.75□□□□□ -1.81
IFT140-202ENST00000397417 SPRR2DP22532 72 aa3.73□□□□□ -1.81
IFT140-202ENST00000397417 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
IFT140-202ENST00000397417 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
IFT140-202ENST00000397417 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
IFT140-202ENST00000397417 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
IFT140-202ENST00000397417 MT1MQ8N339 61 aa3.6□□□□□ -1.83
IFT140-202ENST00000397417 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
IFT140-202ENST00000397417 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
IFT140-202ENST00000397417 MT4P47944 62 aa3.52□□□□□ -1.85
IFT140-202ENST00000397417 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
IFT140-202ENST00000397417 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
IFT140-202ENST00000397417 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
IFT140-202ENST00000397417 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
IFT140-202ENST00000397417 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
IFT140-202ENST00000397417 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
IFT140-202ENST00000397417 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.86
IFT140-202ENST00000397417 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
IFT140-202ENST00000397417 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
IFT140-202ENST00000397417 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
IFT140-202ENST00000397417 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
IFT140-202ENST00000397417 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
IFT140-202ENST00000397417 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
IFT140-202ENST00000397417 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
IFT140-202ENST00000397417 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
IFT140-202ENST00000397417 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
IFT140-202ENST00000397417 MT3P25713 68 aa3.18□□□□□ -1.9
IFT140-202ENST00000397417 MT1AP04731 61 aa3.17□□□□□ -1.9
IFT140-202ENST00000397417 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
IFT140-202ENST00000397417 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
IFT140-202ENST00000397417 PRM1P04553 51 aa3.12□□□□□ -1.91
IFT140-202ENST00000397417 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
IFT140-202ENST00000397417 NEBP20929 6669 aa3.09□□□□□ -1.91
IFT140-202ENST00000397417 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
IFT140-202ENST00000397417 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
IFT140-202ENST00000397417 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
IFT140-202ENST00000397417 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
IFT140-202ENST00000397417 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
IFT140-202ENST00000397417 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
IFT140-202ENST00000397417 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
IFT140-202ENST00000397417 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
IFT140-202ENST00000397417 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
IFT140-202ENST00000397417 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
IFT140-202ENST00000397417 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
IFT140-202ENST00000397417 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
IFT140-202ENST00000397417 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
IFT140-202ENST00000397417 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
IFT140-202ENST00000397417 LCE1CQ5T751 118 aa2.54□□□□□ -2
IFT140-202ENST00000397417 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
IFT140-202ENST00000397417 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
IFT140-202ENST00000397417 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
IFT140-202ENST00000397417 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
IFT140-202ENST00000397417 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
IFT140-202ENST00000397417 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
IFT140-202ENST00000397417 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
IFT140-202ENST00000397417 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
IFT140-202ENST00000397417 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
IFT140-202ENST00000397417 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
IFT140-202ENST00000397417 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
IFT140-202ENST00000397417 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
IFT140-202ENST00000397417 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
IFT140-202ENST00000397417 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
IFT140-202ENST00000397417 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
IFT140-202ENST00000397417 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
IFT140-202ENST00000397417 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
IFT140-202ENST00000397417 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
IFT140-202ENST00000397417 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 74.7 ms