RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
VCPKMT-202ENST00000395860 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
VCPKMT-202ENST00000395860 KRTAP19-3Q7Z4W3 81 aa7.2□□□□□ -1.26
VCPKMT-202ENST00000395860 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
VCPKMT-202ENST00000395860 MT1GP13640 62 aa7.13□□□□□ -1.27
VCPKMT-202ENST00000395860 SPRR2EP22531 72 aa7.13□□□□□ -1.27
VCPKMT-202ENST00000395860 SPRR2BP35325 72 aa7.13□□□□□ -1.27
VCPKMT-202ENST00000395860 SPRR2AP35326 72 aa7.13□□□□□ -1.27
VCPKMT-202ENST00000395860 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
VCPKMT-202ENST00000395860 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
VCPKMT-202ENST00000395860 H3BS24 57 aa7.09□□□□□ -1.27
VCPKMT-202ENST00000395860 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
VCPKMT-202ENST00000395860 MT1MQ8N339 61 aa7.03□□□□□ -1.28
VCPKMT-202ENST00000395860 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
VCPKMT-202ENST00000395860 MDN1Q9NU22 5596 aa7□□□□□ -1.29
VCPKMT-202ENST00000395860 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
VCPKMT-202ENST00000395860 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
VCPKMT-202ENST00000395860 SPRR2DP22532 72 aa6.87□□□□□ -1.31
VCPKMT-202ENST00000395860 NEBP20929 6669 aa6.79□□□□□ -1.32
VCPKMT-202ENST00000395860 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
VCPKMT-202ENST00000395860 DSTQ03001 7570 aaKnown RBP6.65□□□□□ -1.34
VCPKMT-202ENST00000395860 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
VCPKMT-202ENST00000395860 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
VCPKMT-202ENST00000395860 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
VCPKMT-202ENST00000395860 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
VCPKMT-202ENST00000395860 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
VCPKMT-202ENST00000395860 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
VCPKMT-202ENST00000395860 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
VCPKMT-202ENST00000395860 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.4
VCPKMT-202ENST00000395860 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.4
VCPKMT-202ENST00000395860 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
VCPKMT-202ENST00000395860 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
VCPKMT-202ENST00000395860 MT1AP04731 61 aa6.19□□□□□ -1.42
VCPKMT-202ENST00000395860 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
VCPKMT-202ENST00000395860 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
VCPKMT-202ENST00000395860 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
VCPKMT-202ENST00000395860 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
VCPKMT-202ENST00000395860 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
VCPKMT-202ENST00000395860 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
VCPKMT-202ENST00000395860 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
VCPKMT-202ENST00000395860 MT4P47944 62 aa5.97□□□□□ -1.45
VCPKMT-202ENST00000395860 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
VCPKMT-202ENST00000395860 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
VCPKMT-202ENST00000395860 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
VCPKMT-202ENST00000395860 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
VCPKMT-202ENST00000395860 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
VCPKMT-202ENST00000395860 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
VCPKMT-202ENST00000395860 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
VCPKMT-202ENST00000395860 INE1O15225 51 aa5.64□□□□□ -1.51
VCPKMT-202ENST00000395860 MT3P25713 68 aa5.62□□□□□ -1.51
VCPKMT-202ENST00000395860 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
VCPKMT-202ENST00000395860 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
VCPKMT-202ENST00000395860 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
VCPKMT-202ENST00000395860 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
VCPKMT-202ENST00000395860 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
VCPKMT-202ENST00000395860 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
VCPKMT-202ENST00000395860 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.61
VCPKMT-202ENST00000395860 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
VCPKMT-202ENST00000395860 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
VCPKMT-202ENST00000395860 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
VCPKMT-202ENST00000395860 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
VCPKMT-202ENST00000395860 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
VCPKMT-202ENST00000395860 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
VCPKMT-202ENST00000395860 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
VCPKMT-202ENST00000395860 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
VCPKMT-202ENST00000395860 PRM1P04553 51 aa4.4□□□□□ -1.7
VCPKMT-202ENST00000395860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
VCPKMT-202ENST00000395860 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.76
VCPKMT-202ENST00000395860 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
VCPKMT-202ENST00000395860 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
VCPKMT-202ENST00000395860 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
VCPKMT-202ENST00000395860 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
VCPKMT-202ENST00000395860 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
VCPKMT-202ENST00000395860 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
VCPKMT-202ENST00000395860 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
VCPKMT-202ENST00000395860 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
VCPKMT-202ENST00000395860 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 167 ms