RNA–Protein interactions for RNA: ENST00000395311.5

KTN1-204, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KTN1, Length 4,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-204ENST00000395311 PKD1L1Q8TDX9 2849 aa0.8□□□□□ -2.28
KTN1-204ENST00000395311 TPRXLQ17RH7 258 aa0.8□□□□□ -2.28
KTN1-204ENST00000395311 SMR3BP02814 79 aaPredicted RBP0.79□□□□□ -2.28
KTN1-204ENST00000395311 SMR3AQ99954 134 aa0.79□□□□□ -2.28
KTN1-204ENST00000395311 NEBP20929 6669 aa0.79□□□□□ -2.28
KTN1-204ENST00000395311 KRTAP12-1P59990 96 aa0.79□□□□□ -2.28
KTN1-204ENST00000395311 HIVEP1P15822 2718 aa0.78□□□□□ -2.28
KTN1-204ENST00000395311 TENM1Q9UKZ4 2725 aa0.78□□□□□ -2.28
KTN1-204ENST00000395311 KRTAP10-4P60372 401 aaPredicted RBP0.78□□□□□ -2.28
KTN1-204ENST00000395311 KRTAP13-1Q8IUC0 172 aa0.78□□□□□ -2.28
KTN1-204ENST00000395311 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
KTN1-204ENST00000395311 KRTAP12-4P60329 112 aa0.77□□□□□ -2.29
KTN1-204ENST00000395311 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
KTN1-204ENST00000395311 ITPR2Q14571 2701 aa0.76□□□□□ -2.29
KTN1-204ENST00000395311 NF1P21359 2839 aa0.76□□□□□ -2.29
KTN1-204ENST00000395311 KRTAP12-3P60328 96 aa0.75□□□□□ -2.29
KTN1-204ENST00000395311 CENPEQ02224 2701 aa0.75□□□□□ -2.29
KTN1-204ENST00000395311 K7EIL1 84 aa0.74□□□□□ -2.29
KTN1-204ENST00000395311 MXRA5Q9NR99 2828 aa0.73□□□□□ -2.29
KTN1-204ENST00000395311 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
KTN1-204ENST00000395311 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
KTN1-204ENST00000395311 AKAP13Q12802 2813 aa0.72□□□□□ -2.29
KTN1-204ENST00000395311 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
KTN1-204ENST00000395311 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
KTN1-204ENST00000395311 H0YAA0 97 aa0.72□□□□□ -2.29
KTN1-204ENST00000395311 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
KTN1-204ENST00000395311 WDR87Q6ZQQ6 2873 aa0.71□□□□□ -2.3
KTN1-204ENST00000395311 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
KTN1-204ENST00000395311 KMT2DO14686 5537 aa0.7□□□□□ -2.3
KTN1-204ENST00000395311 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
KTN1-204ENST00000395311 TGP01266 2768 aa0.7□□□□□ -2.3
KTN1-204ENST00000395311 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
KTN1-204ENST00000395311 APCP25054 2843 aa0.67□□□□□ -2.3
KTN1-204ENST00000395311 DSPP15924 2871 aaKnown RBP0.66□□□□□ -2.3
KTN1-204ENST00000395311 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
KTN1-204ENST00000395311 SPRR2GQ9BYE4 73 aa0.65□□□□□ -2.3
KTN1-204ENST00000395311 LRBAP50851 2863 aa0.65□□□□□ -2.31
KTN1-204ENST00000395311 TACC2O95359 2948 aa0.65□□□□□ -2.31
KTN1-204ENST00000395311 KRTAP19-2Q3LHN2 52 aa0.65□□□□□ -2.31
KTN1-204ENST00000395311 MUC12Q9UKN1 5478 aa0.62□□□□□ -2.31
KTN1-204ENST00000395311 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
KTN1-204ENST00000395311 HRNRQ86YZ3 2850 aaPredicted RBP0.61□□□□□ -2.31
KTN1-204ENST00000395311 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
KTN1-204ENST00000395311 KRTAP4-1Q9BYQ7 146 aa0.61□□□□□ -2.31
KTN1-204ENST00000395311 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
KTN1-204ENST00000395311 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
KTN1-204ENST00000395311 MT1HL1P0DM35 61 aa0.58□□□□□ -2.32
KTN1-204ENST00000395311 FCGBPQ9Y6R7 5405 aaPredicted RBP0.58□□□□□ -2.32
KTN1-204ENST00000395311 SPRR2EP22531 72 aa0.56□□□□□ -2.32
KTN1-204ENST00000395311 SPRR2DP22532 72 aa0.56□□□□□ -2.32
KTN1-204ENST00000395311 SPRR2BP35325 72 aa0.56□□□□□ -2.32
KTN1-204ENST00000395311 SPRR2AP35326 72 aa0.56□□□□□ -2.32
KTN1-204ENST00000395311 KRTAP19-6Q3LI70 58 aa0.56□□□□□ -2.32
KTN1-204ENST00000395311 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
KTN1-204ENST00000395311 SPRR2FQ96RM1 72 aa0.5□□□□□ -2.33
KTN1-204ENST00000395311 KRTAP19-8Q3LI54 63 aa0.49□□□□□ -2.33
KTN1-204ENST00000395311 PRM1P04553 51 aa0.48□□□□□ -2.33
KTN1-204ENST00000395311 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
KTN1-204ENST00000395311 MT1GP13640 62 aa0.47□□□□□ -2.33
KTN1-204ENST00000395311 MT4P47944 62 aa0.46□□□□□ -2.34
KTN1-204ENST00000395311 MT1HP80294 61 aa0.44□□□□□ -2.34
KTN1-204ENST00000395311 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
KTN1-204ENST00000395311 MT1LQ93083 61 aa0.42□□□□□ -2.34
KTN1-204ENST00000395311 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
KTN1-204ENST00000395311 MT2AP02795 61 aa0.41□□□□□ -2.34
KTN1-204ENST00000395311 MT1FP04733 61 aa0.41□□□□□ -2.34
KTN1-204ENST00000395311 KRTAP19-7Q3SYF9 63 aa0.41□□□□□ -2.34
KTN1-204ENST00000395311 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
KTN1-204ENST00000395311 MT1AP04731 61 aa0.39□□□□□ -2.35
KTN1-204ENST00000395311 MT1BP07438 61 aa0.38□□□□□ -2.35
KTN1-204ENST00000395311 MT1XP80297 61 aa0.38□□□□□ -2.35
KTN1-204ENST00000395311 MT1EP04732 61 aa0.37□□□□□ -2.35
KTN1-204ENST00000395311 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
KTN1-204ENST00000395311 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
KTN1-204ENST00000395311 MT1MQ8N339 61 aa0.36□□□□□ -2.35
KTN1-204ENST00000395311 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
KTN1-204ENST00000395311 KRTAP20-2Q3LI61 65 aa0.34□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms