RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
HIF1A-203ENST00000394997 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
HIF1A-203ENST00000394997 MT1EP04732 61 aa3.65□□□□□ -1.82
HIF1A-203ENST00000394997 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
HIF1A-203ENST00000394997 MT1LQ93083 61 aa3.62□□□□□ -1.83
HIF1A-203ENST00000394997 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
HIF1A-203ENST00000394997 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
HIF1A-203ENST00000394997 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
HIF1A-203ENST00000394997 SPRR2EP22531 72 aa3.54□□□□□ -1.84
HIF1A-203ENST00000394997 SPRR2BP35325 72 aa3.54□□□□□ -1.84
HIF1A-203ENST00000394997 SPRR2AP35326 72 aa3.54□□□□□ -1.84
HIF1A-203ENST00000394997 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
HIF1A-203ENST00000394997 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
HIF1A-203ENST00000394997 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
HIF1A-203ENST00000394997 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
HIF1A-203ENST00000394997 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
HIF1A-203ENST00000394997 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
HIF1A-203ENST00000394997 SPRR2DP22532 72 aa3.4□□□□□ -1.86
HIF1A-203ENST00000394997 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
HIF1A-203ENST00000394997 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
HIF1A-203ENST00000394997 MT1MQ8N339 61 aa3.39□□□□□ -1.87
HIF1A-203ENST00000394997 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
HIF1A-203ENST00000394997 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
HIF1A-203ENST00000394997 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
HIF1A-203ENST00000394997 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
HIF1A-203ENST00000394997 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
HIF1A-203ENST00000394997 MT1GP13640 62 aa3.3□□□□□ -1.88
HIF1A-203ENST00000394997 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
HIF1A-203ENST00000394997 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
HIF1A-203ENST00000394997 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
HIF1A-203ENST00000394997 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
HIF1A-203ENST00000394997 MT4P47944 62 aa3.18□□□□□ -1.9
HIF1A-203ENST00000394997 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
HIF1A-203ENST00000394997 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
HIF1A-203ENST00000394997 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
HIF1A-203ENST00000394997 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
HIF1A-203ENST00000394997 NEBP20929 6669 aa3.07□□□□□ -1.92
HIF1A-203ENST00000394997 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
HIF1A-203ENST00000394997 PRM1P04553 51 aa3.02□□□□□ -1.93
HIF1A-203ENST00000394997 MT1AP04731 61 aa3□□□□□ -1.93
HIF1A-203ENST00000394997 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
HIF1A-203ENST00000394997 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
HIF1A-203ENST00000394997 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
HIF1A-203ENST00000394997 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
HIF1A-203ENST00000394997 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
HIF1A-203ENST00000394997 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
HIF1A-203ENST00000394997 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
HIF1A-203ENST00000394997 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
HIF1A-203ENST00000394997 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
HIF1A-203ENST00000394997 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
HIF1A-203ENST00000394997 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
HIF1A-203ENST00000394997 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
HIF1A-203ENST00000394997 MT3P25713 68 aa2.58□□□□□ -2
HIF1A-203ENST00000394997 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
HIF1A-203ENST00000394997 LCE4AQ5TA78 99 aa2.57□□□□□ -2
HIF1A-203ENST00000394997 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
HIF1A-203ENST00000394997 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
HIF1A-203ENST00000394997 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
HIF1A-203ENST00000394997 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
HIF1A-203ENST00000394997 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
HIF1A-203ENST00000394997 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
HIF1A-203ENST00000394997 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
HIF1A-203ENST00000394997 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
HIF1A-203ENST00000394997 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
HIF1A-203ENST00000394997 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
HIF1A-203ENST00000394997 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
HIF1A-203ENST00000394997 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-203ENST00000394997 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
HIF1A-203ENST00000394997 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
HIF1A-203ENST00000394997 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
HIF1A-203ENST00000394997 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
HIF1A-203ENST00000394997 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-203ENST00000394997 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
HIF1A-203ENST00000394997 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
HIF1A-203ENST00000394997 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
HIF1A-203ENST00000394997 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
HIF1A-203ENST00000394997 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms