RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
PRKCD-202ENST00000394729 MDN1Q9NU22 5596 aa7.19□□□□□ -1.26
PRKCD-202ENST00000394729 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
PRKCD-202ENST00000394729 MT1LQ93083 61 aa7.16□□□□□ -1.26
PRKCD-202ENST00000394729 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
PRKCD-202ENST00000394729 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
PRKCD-202ENST00000394729 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
PRKCD-202ENST00000394729 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
PRKCD-202ENST00000394729 MT1MQ8N339 61 aa6.83□□□□□ -1.32
PRKCD-202ENST00000394729 MT1GP13640 62 aa6.83□□□□□ -1.32
PRKCD-202ENST00000394729 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
PRKCD-202ENST00000394729 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
PRKCD-202ENST00000394729 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
PRKCD-202ENST00000394729 SPRR2EP22531 72 aa6.67□□□□□ -1.34
PRKCD-202ENST00000394729 SPRR2BP35325 72 aa6.67□□□□□ -1.34
PRKCD-202ENST00000394729 SPRR2AP35326 72 aa6.67□□□□□ -1.34
PRKCD-202ENST00000394729 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.35
PRKCD-202ENST00000394729 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
PRKCD-202ENST00000394729 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
PRKCD-202ENST00000394729 INE1O15225 51 aa6.51□□□□□ -1.37
PRKCD-202ENST00000394729 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
PRKCD-202ENST00000394729 OBSCNQ5VST9 7968 aa6.4□□□□□ -1.38
PRKCD-202ENST00000394729 SPRR2DP22532 72 aa6.37□□□□□ -1.39
PRKCD-202ENST00000394729 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
PRKCD-202ENST00000394729 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
PRKCD-202ENST00000394729 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
PRKCD-202ENST00000394729 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
PRKCD-202ENST00000394729 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
PRKCD-202ENST00000394729 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
PRKCD-202ENST00000394729 NEBP20929 6669 aa6.17□□□□□ -1.42
PRKCD-202ENST00000394729 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
PRKCD-202ENST00000394729 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
PRKCD-202ENST00000394729 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
PRKCD-202ENST00000394729 MT1AP04731 61 aa5.96□□□□□ -1.46
PRKCD-202ENST00000394729 MT4P47944 62 aa5.78□□□□□ -1.48
PRKCD-202ENST00000394729 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
PRKCD-202ENST00000394729 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PRKCD-202ENST00000394729 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
PRKCD-202ENST00000394729 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
PRKCD-202ENST00000394729 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
PRKCD-202ENST00000394729 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
PRKCD-202ENST00000394729 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
PRKCD-202ENST00000394729 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
PRKCD-202ENST00000394729 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
PRKCD-202ENST00000394729 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
PRKCD-202ENST00000394729 MT3P25713 68 aa5.42□□□□□ -1.54
PRKCD-202ENST00000394729 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
PRKCD-202ENST00000394729 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
PRKCD-202ENST00000394729 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
PRKCD-202ENST00000394729 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
PRKCD-202ENST00000394729 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
PRKCD-202ENST00000394729 PRM1P04553 51 aa4.94□□□□□ -1.62
PRKCD-202ENST00000394729 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
PRKCD-202ENST00000394729 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
PRKCD-202ENST00000394729 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
PRKCD-202ENST00000394729 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
PRKCD-202ENST00000394729 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
PRKCD-202ENST00000394729 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
PRKCD-202ENST00000394729 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
PRKCD-202ENST00000394729 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
PRKCD-202ENST00000394729 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
PRKCD-202ENST00000394729 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
PRKCD-202ENST00000394729 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
PRKCD-202ENST00000394729 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
PRKCD-202ENST00000394729 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
PRKCD-202ENST00000394729 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
PRKCD-202ENST00000394729 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
PRKCD-202ENST00000394729 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
PRKCD-202ENST00000394729 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
PRKCD-202ENST00000394729 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
PRKCD-202ENST00000394729 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
PRKCD-202ENST00000394729 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
PRKCD-202ENST00000394729 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
PRKCD-202ENST00000394729 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
PRKCD-202ENST00000394729 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
PRKCD-202ENST00000394729 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
PRKCD-202ENST00000394729 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 90.6 ms