RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
SRSF5-201ENST00000394366 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
SRSF5-201ENST00000394366 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
SRSF5-201ENST00000394366 NEBP20929 6669 aa5.09□□□□□ -1.6
SRSF5-201ENST00000394366 KMT2DO14686 5537 aa5.08□□□□□ -1.6
SRSF5-201ENST00000394366 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
SRSF5-201ENST00000394366 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
SRSF5-201ENST00000394366 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
SRSF5-201ENST00000394366 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
SRSF5-201ENST00000394366 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
SRSF5-201ENST00000394366 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
SRSF5-201ENST00000394366 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
SRSF5-201ENST00000394366 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
SRSF5-201ENST00000394366 SPRR2EP22531 72 aa4.95□□□□□ -1.62
SRSF5-201ENST00000394366 SPRR2BP35325 72 aa4.95□□□□□ -1.62
SRSF5-201ENST00000394366 SPRR2AP35326 72 aa4.95□□□□□ -1.62
SRSF5-201ENST00000394366 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
SRSF5-201ENST00000394366 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
SRSF5-201ENST00000394366 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
SRSF5-201ENST00000394366 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
SRSF5-201ENST00000394366 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SRSF5-201ENST00000394366 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SRSF5-201ENST00000394366 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SRSF5-201ENST00000394366 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
SRSF5-201ENST00000394366 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
SRSF5-201ENST00000394366 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
SRSF5-201ENST00000394366 MT1EP04732 61 aa4.8□□□□□ -1.64
SRSF5-201ENST00000394366 SPRR2DP22532 72 aa4.79□□□□□ -1.64
SRSF5-201ENST00000394366 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SRSF5-201ENST00000394366 MT1LQ93083 61 aa4.72□□□□□ -1.65
SRSF5-201ENST00000394366 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
SRSF5-201ENST00000394366 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
SRSF5-201ENST00000394366 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
SRSF5-201ENST00000394366 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
SRSF5-201ENST00000394366 MT1GP13640 62 aa4.61□□□□□ -1.67
SRSF5-201ENST00000394366 MT1MQ8N339 61 aa4.51□□□□□ -1.69
SRSF5-201ENST00000394366 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SRSF5-201ENST00000394366 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
SRSF5-201ENST00000394366 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
SRSF5-201ENST00000394366 MT4P47944 62 aa4.17□□□□□ -1.74
SRSF5-201ENST00000394366 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
SRSF5-201ENST00000394366 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SRSF5-201ENST00000394366 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SRSF5-201ENST00000394366 MT1AP04731 61 aa4.03□□□□□ -1.76
SRSF5-201ENST00000394366 INE1O15225 51 aa3.98□□□□□ -1.77
SRSF5-201ENST00000394366 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
SRSF5-201ENST00000394366 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SRSF5-201ENST00000394366 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
SRSF5-201ENST00000394366 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SRSF5-201ENST00000394366 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
SRSF5-201ENST00000394366 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
SRSF5-201ENST00000394366 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
SRSF5-201ENST00000394366 MT3P25713 68 aa3.67□□□□□ -1.82
SRSF5-201ENST00000394366 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
SRSF5-201ENST00000394366 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
SRSF5-201ENST00000394366 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
SRSF5-201ENST00000394366 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
SRSF5-201ENST00000394366 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SRSF5-201ENST00000394366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
SRSF5-201ENST00000394366 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SRSF5-201ENST00000394366 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
SRSF5-201ENST00000394366 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SRSF5-201ENST00000394366 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SRSF5-201ENST00000394366 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SRSF5-201ENST00000394366 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
SRSF5-201ENST00000394366 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
SRSF5-201ENST00000394366 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
SRSF5-201ENST00000394366 PRM1P04553 51 aa3.08□□□□□ -1.92
SRSF5-201ENST00000394366 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SRSF5-201ENST00000394366 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SRSF5-201ENST00000394366 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SRSF5-201ENST00000394366 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
SRSF5-201ENST00000394366 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SRSF5-201ENST00000394366 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SRSF5-201ENST00000394366 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SRSF5-201ENST00000394366 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
SRSF5-201ENST00000394366 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 135.4 ms