RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
CACNB1-203ENST00000394310 KRTAP19-3Q7Z4W3 81 aa7.77□□□□□ -1.17
CACNB1-203ENST00000394310 MT1GP13640 62 aa7.73□□□□□ -1.17
CACNB1-203ENST00000394310 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
CACNB1-203ENST00000394310 LCE5AQ5TCM9 118 aa7.68□□□□□ -1.18
CACNB1-203ENST00000394310 SPRR5A0A1B0GTR4 108 aa7.66□□□□□ -1.18
CACNB1-203ENST00000394310 LCE1AQ5T7P2 110 aa7.66□□□□□ -1.18
CACNB1-203ENST00000394310 SPRR2EP22531 72 aa7.64□□□□□ -1.19
CACNB1-203ENST00000394310 SPRR2BP35325 72 aa7.64□□□□□ -1.19
CACNB1-203ENST00000394310 SPRR2AP35326 72 aa7.64□□□□□ -1.19
CACNB1-203ENST00000394310 MDN1Q9NU22 5596 aa7.59□□□□□ -1.19
CACNB1-203ENST00000394310 MT1MQ8N339 61 aa7.59□□□□□ -1.2
CACNB1-203ENST00000394310 KRTAP4-7Q9BYR0 210 aa7.54□□□□□ -1.2
CACNB1-203ENST00000394310 H3BS24 57 aa7.51□□□□□ -1.21
CACNB1-203ENST00000394310 KRTAP4-3Q9BYR4 195 aa7.38□□□□□ -1.23
CACNB1-203ENST00000394310 SPRR2DP22532 72 aa7.36□□□□□ -1.23
CACNB1-203ENST00000394310 NEBP20929 6669 aa7.35□□□□□ -1.23
CACNB1-203ENST00000394310 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
CACNB1-203ENST00000394310 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
CACNB1-203ENST00000394310 A0A0A0MQY5 61 aa7.27□□□□□ -1.25
CACNB1-203ENST00000394310 DSTQ03001 7570 aaKnown RBP7.19□□□□□ -1.26
CACNB1-203ENST00000394310 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
CACNB1-203ENST00000394310 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
CACNB1-203ENST00000394310 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
CACNB1-203ENST00000394310 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
CACNB1-203ENST00000394310 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
CACNB1-203ENST00000394310 KRTAP20-1Q3LI63 56 aa6.94□□□□□ -1.3
CACNB1-203ENST00000394310 KRTAP5-5Q701N2 237 aaPredicted RBP6.9□□□□□ -1.3
CACNB1-203ENST00000394310 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
CACNB1-203ENST00000394310 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
CACNB1-203ENST00000394310 MT1AP04731 61 aa6.71□□□□□ -1.34
CACNB1-203ENST00000394310 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
CACNB1-203ENST00000394310 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
CACNB1-203ENST00000394310 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
CACNB1-203ENST00000394310 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
CACNB1-203ENST00000394310 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
CACNB1-203ENST00000394310 MT4P47944 62 aa6.41□□□□□ -1.38
CACNB1-203ENST00000394310 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
CACNB1-203ENST00000394310 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
CACNB1-203ENST00000394310 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CACNB1-203ENST00000394310 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
CACNB1-203ENST00000394310 KRTAP20-2Q3LI61 65 aa6.18□□□□□ -1.42
CACNB1-203ENST00000394310 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
CACNB1-203ENST00000394310 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
CACNB1-203ENST00000394310 MT3P25713 68 aa6.1□□□□□ -1.43
CACNB1-203ENST00000394310 KRTAP5-2Q701N4 177 aa6.01□□□□□ -1.45
CACNB1-203ENST00000394310 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
CACNB1-203ENST00000394310 INE1O15225 51 aa5.83□□□□□ -1.48
CACNB1-203ENST00000394310 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
CACNB1-203ENST00000394310 LCE3EQ5T5B0 92 aa5.61□□□□□ -1.51
CACNB1-203ENST00000394310 AHNAK2Q8IVF2 5795 aa5.53□□□□□ -1.52
CACNB1-203ENST00000394310 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
CACNB1-203ENST00000394310 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
CACNB1-203ENST00000394310 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
CACNB1-203ENST00000394310 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
CACNB1-203ENST00000394310 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
CACNB1-203ENST00000394310 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
CACNB1-203ENST00000394310 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
CACNB1-203ENST00000394310 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
CACNB1-203ENST00000394310 LCE1CQ5T751 118 aa5□□□□□ -1.61
CACNB1-203ENST00000394310 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
CACNB1-203ENST00000394310 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.61
CACNB1-203ENST00000394310 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
CACNB1-203ENST00000394310 PRM1P04553 51 aa4.79□□□□□ -1.64
CACNB1-203ENST00000394310 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
CACNB1-203ENST00000394310 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
CACNB1-203ENST00000394310 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
CACNB1-203ENST00000394310 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
CACNB1-203ENST00000394310 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
CACNB1-203ENST00000394310 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
CACNB1-203ENST00000394310 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
CACNB1-203ENST00000394310 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
CACNB1-203ENST00000394310 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
CACNB1-203ENST00000394310 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
CACNB1-203ENST00000394310 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CACNB1-203ENST00000394310 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
CACNB1-203ENST00000394310 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 100.1 ms