RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 C6orf48Q9UBA6 75 aa2.04□□□□□ -2.08
TRAV35-201ENST00000390462 NDUFA1O15239 70 aa2.02□□□□□ -2.09
TRAV35-201ENST00000390462 MRPL34Q9BQ48 92 aaKnown RBP2.02□□□□□ -2.09
TRAV35-201ENST00000390462 TOMM5Q8N4H5 51 aa2.01□□□□□ -2.09
TRAV35-201ENST00000390462 PRLHP81277 87 aa2□□□□□ -2.09
TRAV35-201ENST00000390462 C9orf92A6NGG3 77 aa1.99□□□□□ -2.09
TRAV35-201ENST00000390462 SPINK1P00995 79 aa1.99□□□□□ -2.09
TRAV35-201ENST00000390462 RPL39LQ96EH5 51 aaKnown RBP1.99□□□□□ -2.09
TRAV35-201ENST00000390462 KCNQ1DNQ9H478 68 aa1.99□□□□□ -2.09
TRAV35-201ENST00000390462 TMEM167BQ9NRX6 74 aa1.97□□□□□ -2.09
TRAV35-201ENST00000390462 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
TRAV35-201ENST00000390462 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
TRAV35-201ENST00000390462 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
TRAV35-201ENST00000390462 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
TRAV35-201ENST00000390462 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
TRAV35-201ENST00000390462 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
TRAV35-201ENST00000390462 FCER1GP30273 86 aa1.92□□□□□ -2.1
TRAV35-201ENST00000390462 POLR2KP53803 58 aaKnown RBP1.91□□□□□ -2.1
TRAV35-201ENST00000390462 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
TRAV35-201ENST00000390462 SPRR1AP35321 89 aa1.9□□□□□ -2.11
TRAV35-201ENST00000390462 RPL39P62891 51 aaKnown RBP1.9□□□□□ -2.11
TRAV35-201ENST00000390462 SERF2P84101 59 aa1.89□□□□□ -2.11
TRAV35-201ENST00000390462 SPRR2EP22531 72 aa1.88□□□□□ -2.11
TRAV35-201ENST00000390462 SPRR2BP35325 72 aa1.88□□□□□ -2.11
TRAV35-201ENST00000390462 SPRR2AP35326 72 aa1.88□□□□□ -2.11
TRAV35-201ENST00000390462 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
TRAV35-201ENST00000390462 SPRR1BP22528 89 aa1.86□□□□□ -2.11
TRAV35-201ENST00000390462 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
TRAV35-201ENST00000390462 K7EMI3 77 aa1.84□□□□□ -2.11
TRAV35-201ENST00000390462 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
TRAV35-201ENST00000390462 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
TRAV35-201ENST00000390462 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
TRAV35-201ENST00000390462 SPRR2FQ96RM1 72 aa1.83□□□□□ -2.12
TRAV35-201ENST00000390462 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
TRAV35-201ENST00000390462 SPRR2DP22532 72 aa1.82□□□□□ -2.12
TRAV35-201ENST00000390462 SMIM2Q9BVW6 85 aa1.82□□□□□ -2.12
TRAV35-201ENST00000390462 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
TRAV35-201ENST00000390462 MT1BP07438 61 aa1.78□□□□□ -2.12
TRAV35-201ENST00000390462 IGIPA6NJ69 53 aa1.76□□□□□ -2.13
TRAV35-201ENST00000390462 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
TRAV35-201ENST00000390462 LINC00158P58513 81 aa1.75□□□□□ -2.13
TRAV35-201ENST00000390462 WFDC13Q8IUB5 93 aa1.74□□□□□ -2.13
TRAV35-201ENST00000390462 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
TRAV35-201ENST00000390462 H0YAA0 97 aa1.72□□□□□ -2.13
TRAV35-201ENST00000390462 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
TRAV35-201ENST00000390462 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
TRAV35-201ENST00000390462 SMIM27A0A1W2PRY6 76 aa1.69□□□□□ -2.14
TRAV35-201ENST00000390462 PLNP26678 52 aa1.66□□□□□ -2.14
TRAV35-201ENST00000390462 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
TRAV35-201ENST00000390462 IGLV5-48A0A075B6I7 105 aa1.64□□□□□ -2.15
TRAV35-201ENST00000390462 MT4P47944 62 aa1.62□□□□□ -2.15
TRAV35-201ENST00000390462 LINC01546A6NGU7 62 aa1.61□□□□□ -2.15
TRAV35-201ENST00000390462 H0YGX0 51 aa1.59□□□□□ -2.15
TRAV35-201ENST00000390462 MT1XP80297 61 aa1.58□□□□□ -2.16
TRAV35-201ENST00000390462 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
TRAV35-201ENST00000390462 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
TRAV35-201ENST00000390462 LINC00308Q8TCZ7 52 aa1.54□□□□□ -2.16
TRAV35-201ENST00000390462 S4R3F8 94 aa1.46□□□□□ -2.18
TRAV35-201ENST00000390462 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
TRAV35-201ENST00000390462 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
TRAV35-201ENST00000390462 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
TRAV35-201ENST00000390462 MT1EP04732 61 aa1.42□□□□□ -2.18
TRAV35-201ENST00000390462 MT1MQ8N339 61 aa1.38□□□□□ -2.19
TRAV35-201ENST00000390462 MT1GP13640 62 aa1.37□□□□□ -2.19
TRAV35-201ENST00000390462 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
TRAV35-201ENST00000390462 MMP24-AS1A0A0U1RRL7 71 aa1.35□□□□□ -2.19
TRAV35-201ENST00000390462 M0QZ58 72 aa1.3□□□□□ -2.2
TRAV35-201ENST00000390462 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
TRAV35-201ENST00000390462 MT1LQ93083 61 aa1.3□□□□□ -2.2
TRAV35-201ENST00000390462 PRM1P04553 51 aa1.18□□□□□ -2.22
TRAV35-201ENST00000390462 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
TRAV35-201ENST00000390462 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
TRAV35-201ENST00000390462 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
TRAV35-201ENST00000390462 MT1AP04731 61 aa1.1□□□□□ -2.23
TRAV35-201ENST00000390462 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
TRAV35-201ENST00000390462 TNP1P09430 55 aa0.97□□□□□ -2.25
TRAV35-201ENST00000390462 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 106.8 ms