RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
CAPRIN1-202ENST00000389645 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
CAPRIN1-202ENST00000389645 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.73
CAPRIN1-202ENST00000389645 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
CAPRIN1-202ENST00000389645 MT1EP04732 61 aa4.2□□□□□ -1.74
CAPRIN1-202ENST00000389645 MT1LQ93083 61 aa4.14□□□□□ -1.75
CAPRIN1-202ENST00000389645 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
CAPRIN1-202ENST00000389645 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.76
CAPRIN1-202ENST00000389645 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
CAPRIN1-202ENST00000389645 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
CAPRIN1-202ENST00000389645 MT1GP13640 62 aa4.04□□□□□ -1.76
CAPRIN1-202ENST00000389645 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
CAPRIN1-202ENST00000389645 MT1MQ8N339 61 aa3.95□□□□□ -1.78
CAPRIN1-202ENST00000389645 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
CAPRIN1-202ENST00000389645 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
CAPRIN1-202ENST00000389645 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
CAPRIN1-202ENST00000389645 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
CAPRIN1-202ENST00000389645 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
CAPRIN1-202ENST00000389645 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
CAPRIN1-202ENST00000389645 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
CAPRIN1-202ENST00000389645 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
CAPRIN1-202ENST00000389645 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
CAPRIN1-202ENST00000389645 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
CAPRIN1-202ENST00000389645 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
CAPRIN1-202ENST00000389645 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
CAPRIN1-202ENST00000389645 SPRR2EP22531 72 aa3.82□□□□□ -1.8
CAPRIN1-202ENST00000389645 SPRR2BP35325 72 aa3.82□□□□□ -1.8
CAPRIN1-202ENST00000389645 SPRR2AP35326 72 aa3.82□□□□□ -1.8
CAPRIN1-202ENST00000389645 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
CAPRIN1-202ENST00000389645 SPRR2DP22532 72 aa3.66□□□□□ -1.82
CAPRIN1-202ENST00000389645 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
CAPRIN1-202ENST00000389645 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
CAPRIN1-202ENST00000389645 NEBP20929 6669 aa3.57□□□□□ -1.84
CAPRIN1-202ENST00000389645 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CAPRIN1-202ENST00000389645 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
CAPRIN1-202ENST00000389645 PRM1P04553 51 aa3.5□□□□□ -1.85
CAPRIN1-202ENST00000389645 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CAPRIN1-202ENST00000389645 MT1AP04731 61 aa3.46□□□□□ -1.85
CAPRIN1-202ENST00000389645 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
CAPRIN1-202ENST00000389645 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
CAPRIN1-202ENST00000389645 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CAPRIN1-202ENST00000389645 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CAPRIN1-202ENST00000389645 MT4P47944 62 aa3.27□□□□□ -1.89
CAPRIN1-202ENST00000389645 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
CAPRIN1-202ENST00000389645 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
CAPRIN1-202ENST00000389645 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
CAPRIN1-202ENST00000389645 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
CAPRIN1-202ENST00000389645 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
CAPRIN1-202ENST00000389645 MT3P25713 68 aa3.18□□□□□ -1.9
CAPRIN1-202ENST00000389645 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
CAPRIN1-202ENST00000389645 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CAPRIN1-202ENST00000389645 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
CAPRIN1-202ENST00000389645 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
CAPRIN1-202ENST00000389645 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CAPRIN1-202ENST00000389645 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.93
CAPRIN1-202ENST00000389645 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
CAPRIN1-202ENST00000389645 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CAPRIN1-202ENST00000389645 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
CAPRIN1-202ENST00000389645 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
CAPRIN1-202ENST00000389645 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
CAPRIN1-202ENST00000389645 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
CAPRIN1-202ENST00000389645 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
CAPRIN1-202ENST00000389645 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
CAPRIN1-202ENST00000389645 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CAPRIN1-202ENST00000389645 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CAPRIN1-202ENST00000389645 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
CAPRIN1-202ENST00000389645 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CAPRIN1-202ENST00000389645 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CAPRIN1-202ENST00000389645 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
CAPRIN1-202ENST00000389645 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CAPRIN1-202ENST00000389645 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
CAPRIN1-202ENST00000389645 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CAPRIN1-202ENST00000389645 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CAPRIN1-202ENST00000389645 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CAPRIN1-202ENST00000389645 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CAPRIN1-202ENST00000389645 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CAPRIN1-202ENST00000389645 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 27.4 ms