RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 MUC12Q9UKN1 5478 aa8.62□□□□□ -1.03
ECHDC3-201ENST00000379215 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
ECHDC3-201ENST00000379215 MT1GP13640 62 aa8.6□□□□□ -1.03
ECHDC3-201ENST00000379215 LCE3CQ5T5A8 94 aa8.58□□□□□ -1.04
ECHDC3-201ENST00000379215 LCE1AQ5T7P2 110 aa8.52□□□□□ -1.05
ECHDC3-201ENST00000379215 LCE5AQ5TCM9 118 aa8.52□□□□□ -1.05
ECHDC3-201ENST00000379215 SPRR2EP22531 72 aa8.5□□□□□ -1.05
ECHDC3-201ENST00000379215 SPRR2BP35325 72 aa8.5□□□□□ -1.05
ECHDC3-201ENST00000379215 SPRR2AP35326 72 aa8.5□□□□□ -1.05
ECHDC3-201ENST00000379215 MT1MQ8N339 61 aa8.45□□□□□ -1.06
ECHDC3-201ENST00000379215 SPRR5A0A1B0GTR4 108 aa8.43□□□□□ -1.06
ECHDC3-201ENST00000379215 MDN1Q9NU22 5596 aa8.42□□□□□ -1.06
ECHDC3-201ENST00000379215 KRTAP4-7Q9BYR0 210 aa8.34□□□□□ -1.07
ECHDC3-201ENST00000379215 SPRR2DP22532 72 aa8.21□□□□□ -1.1
ECHDC3-201ENST00000379215 NEBP20929 6669 aa8.17□□□□□ -1.1
ECHDC3-201ENST00000379215 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
ECHDC3-201ENST00000379215 KRTAP4-3Q9BYR4 195 aa8.16□□□□□ -1.1
ECHDC3-201ENST00000379215 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
ECHDC3-201ENST00000379215 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
ECHDC3-201ENST00000379215 DSTQ03001 7570 aaKnown RBP7.86□□□□□ -1.15
ECHDC3-201ENST00000379215 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
ECHDC3-201ENST00000379215 KRTAP2-3P0C7H8 128 aa7.74□□□□□ -1.17
ECHDC3-201ENST00000379215 KRTAP2-4Q9BYR9 128 aa7.74□□□□□ -1.17
ECHDC3-201ENST00000379215 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
ECHDC3-201ENST00000379215 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
ECHDC3-201ENST00000379215 KRTAP5-5Q701N2 237 aaPredicted RBP7.63□□□□□ -1.19
ECHDC3-201ENST00000379215 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
ECHDC3-201ENST00000379215 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
ECHDC3-201ENST00000379215 MT1AP04731 61 aa7.48□□□□□ -1.21
ECHDC3-201ENST00000379215 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
ECHDC3-201ENST00000379215 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
ECHDC3-201ENST00000379215 KRTAP6-1Q3LI64 71 aa7.34□□□□□ -1.24
ECHDC3-201ENST00000379215 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
ECHDC3-201ENST00000379215 SYNE1Q8NF91 8797 aaKnown RBP7.15□□□□□ -1.26
ECHDC3-201ENST00000379215 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
ECHDC3-201ENST00000379215 MT4P47944 62 aa7.07□□□□□ -1.28
ECHDC3-201ENST00000379215 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
ECHDC3-201ENST00000379215 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
ECHDC3-201ENST00000379215 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
ECHDC3-201ENST00000379215 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.31
ECHDC3-201ENST00000379215 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
ECHDC3-201ENST00000379215 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
ECHDC3-201ENST00000379215 MT3P25713 68 aa6.81□□□□□ -1.32
ECHDC3-201ENST00000379215 KRTAP6-2Q3LI66 62 aa6.8□□□□□ -1.32
ECHDC3-201ENST00000379215 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
ECHDC3-201ENST00000379215 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
ECHDC3-201ENST00000379215 INE1O15225 51 aa6.48□□□□□ -1.37
ECHDC3-201ENST00000379215 H3BS24 57 aa6.43□□□□□ -1.38
ECHDC3-201ENST00000379215 LCE3DQ9BYE3 92 aa6.43□□□□□ -1.38
ECHDC3-201ENST00000379215 LCE3EQ5T5B0 92 aa6.25□□□□□ -1.41
ECHDC3-201ENST00000379215 AHNAK2Q8IVF2 5795 aa6.15□□□□□ -1.42
ECHDC3-201ENST00000379215 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
ECHDC3-201ENST00000379215 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
ECHDC3-201ENST00000379215 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
ECHDC3-201ENST00000379215 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
ECHDC3-201ENST00000379215 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
ECHDC3-201ENST00000379215 KRTAP5-8O75690 187 aa5.77□□□□□ -1.48
ECHDC3-201ENST00000379215 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
ECHDC3-201ENST00000379215 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.51
ECHDC3-201ENST00000379215 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
ECHDC3-201ENST00000379215 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
ECHDC3-201ENST00000379215 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
ECHDC3-201ENST00000379215 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
ECHDC3-201ENST00000379215 PRM1P04553 51 aa5.32□□□□□ -1.56
ECHDC3-201ENST00000379215 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
ECHDC3-201ENST00000379215 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
ECHDC3-201ENST00000379215 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
ECHDC3-201ENST00000379215 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
ECHDC3-201ENST00000379215 KRTAP21-2Q3LI59 83 aa4.82□□□□□ -1.64
ECHDC3-201ENST00000379215 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
ECHDC3-201ENST00000379215 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
ECHDC3-201ENST00000379215 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
ECHDC3-201ENST00000379215 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.73
ECHDC3-201ENST00000379215 PHGR1C9JFL3 82 aa4.2□□□□□ -1.74
ECHDC3-201ENST00000379215 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
ECHDC3-201ENST00000379215 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
ECHDC3-201ENST00000379215 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms