RNA–Protein interactions for RNA: ENST00000378595.7

AFF4-203, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best) BASIC

Gene AFF4, Length 3,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-203ENST00000378595 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
AFF4-203ENST00000378595 MT1GP13640 62 aa4.05□□□□□ -1.76
AFF4-203ENST00000378595 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
AFF4-203ENST00000378595 MT1LQ93083 61 aa4.01□□□□□ -1.77
AFF4-203ENST00000378595 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
AFF4-203ENST00000378595 MT1EP04732 61 aa3.98□□□□□ -1.77
AFF4-203ENST00000378595 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
AFF4-203ENST00000378595 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
AFF4-203ENST00000378595 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
AFF4-203ENST00000378595 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
AFF4-203ENST00000378595 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
AFF4-203ENST00000378595 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
AFF4-203ENST00000378595 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
AFF4-203ENST00000378595 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
AFF4-203ENST00000378595 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
AFF4-203ENST00000378595 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
AFF4-203ENST00000378595 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
AFF4-203ENST00000378595 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
AFF4-203ENST00000378595 MT1MQ8N339 61 aa3.76□□□□□ -1.81
AFF4-203ENST00000378595 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
AFF4-203ENST00000378595 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
AFF4-203ENST00000378595 SPRR2EP22531 72 aa3.52□□□□□ -1.85
AFF4-203ENST00000378595 SPRR2BP35325 72 aa3.52□□□□□ -1.85
AFF4-203ENST00000378595 SPRR2AP35326 72 aa3.52□□□□□ -1.85
AFF4-203ENST00000378595 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
AFF4-203ENST00000378595 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
AFF4-203ENST00000378595 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
AFF4-203ENST00000378595 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
AFF4-203ENST00000378595 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
AFF4-203ENST00000378595 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
AFF4-203ENST00000378595 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
AFF4-203ENST00000378595 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
AFF4-203ENST00000378595 PRM1P04553 51 aa3.37□□□□□ -1.87
AFF4-203ENST00000378595 SPRR2DP22532 72 aa3.36□□□□□ -1.87
AFF4-203ENST00000378595 MT1AP04731 61 aa3.3□□□□□ -1.88
AFF4-203ENST00000378595 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
AFF4-203ENST00000378595 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
AFF4-203ENST00000378595 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
AFF4-203ENST00000378595 NEBP20929 6669 aa3.18□□□□□ -1.9
AFF4-203ENST00000378595 MT4P47944 62 aa3.16□□□□□ -1.9
AFF4-203ENST00000378595 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
AFF4-203ENST00000378595 MT3P25713 68 aa3.09□□□□□ -1.91
AFF4-203ENST00000378595 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
AFF4-203ENST00000378595 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
AFF4-203ENST00000378595 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
AFF4-203ENST00000378595 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
AFF4-203ENST00000378595 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
AFF4-203ENST00000378595 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
AFF4-203ENST00000378595 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
AFF4-203ENST00000378595 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
AFF4-203ENST00000378595 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
AFF4-203ENST00000378595 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
AFF4-203ENST00000378595 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
AFF4-203ENST00000378595 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
AFF4-203ENST00000378595 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
AFF4-203ENST00000378595 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
AFF4-203ENST00000378595 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
AFF4-203ENST00000378595 LCE1FQ5T754 118 aa2.53□□□□□ -2
AFF4-203ENST00000378595 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
AFF4-203ENST00000378595 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
AFF4-203ENST00000378595 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
AFF4-203ENST00000378595 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
AFF4-203ENST00000378595 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
AFF4-203ENST00000378595 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
AFF4-203ENST00000378595 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
AFF4-203ENST00000378595 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
AFF4-203ENST00000378595 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
AFF4-203ENST00000378595 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
AFF4-203ENST00000378595 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
AFF4-203ENST00000378595 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
AFF4-203ENST00000378595 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
AFF4-203ENST00000378595 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
AFF4-203ENST00000378595 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
AFF4-203ENST00000378595 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
AFF4-203ENST00000378595 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
AFF4-203ENST00000378595 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
AFF4-203ENST00000378595 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 223.2 ms