RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
PRDM16-203ENST00000378391 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
PRDM16-203ENST00000378391 MT1EP04732 61 aa4.63□□□□□ -1.67
PRDM16-203ENST00000378391 UBR4Q5T4S7 5183 aa4.62□□□□□ -1.67
PRDM16-203ENST00000378391 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
PRDM16-203ENST00000378391 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
PRDM16-203ENST00000378391 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
PRDM16-203ENST00000378391 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
PRDM16-203ENST00000378391 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
PRDM16-203ENST00000378391 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
PRDM16-203ENST00000378391 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
PRDM16-203ENST00000378391 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
PRDM16-203ENST00000378391 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
PRDM16-203ENST00000378391 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
PRDM16-203ENST00000378391 MT1MQ8N339 61 aa4.47□□□□□ -1.69
PRDM16-203ENST00000378391 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
PRDM16-203ENST00000378391 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
PRDM16-203ENST00000378391 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
PRDM16-203ENST00000378391 KMT2DO14686 5537 aa4.35□□□□□ -1.71
PRDM16-203ENST00000378391 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
PRDM16-203ENST00000378391 MT1AP04731 61 aa4.2□□□□□ -1.74
PRDM16-203ENST00000378391 USH2AO75445 5202 aa4.2□□□□□ -1.74
PRDM16-203ENST00000378391 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
PRDM16-203ENST00000378391 MT4P47944 62 aa4.17□□□□□ -1.74
PRDM16-203ENST00000378391 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
PRDM16-203ENST00000378391 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
PRDM16-203ENST00000378391 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
PRDM16-203ENST00000378391 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
PRDM16-203ENST00000378391 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
PRDM16-203ENST00000378391 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
PRDM16-203ENST00000378391 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
PRDM16-203ENST00000378391 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
PRDM16-203ENST00000378391 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
PRDM16-203ENST00000378391 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
PRDM16-203ENST00000378391 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
PRDM16-203ENST00000378391 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
PRDM16-203ENST00000378391 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PRDM16-203ENST00000378391 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
PRDM16-203ENST00000378391 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
PRDM16-203ENST00000378391 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
PRDM16-203ENST00000378391 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
PRDM16-203ENST00000378391 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
PRDM16-203ENST00000378391 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
PRDM16-203ENST00000378391 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
PRDM16-203ENST00000378391 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PRDM16-203ENST00000378391 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
PRDM16-203ENST00000378391 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
PRDM16-203ENST00000378391 NEBP20929 6669 aa3.51□□□□□ -1.85
PRDM16-203ENST00000378391 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
PRDM16-203ENST00000378391 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
PRDM16-203ENST00000378391 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PRDM16-203ENST00000378391 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
PRDM16-203ENST00000378391 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
PRDM16-203ENST00000378391 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
PRDM16-203ENST00000378391 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
PRDM16-203ENST00000378391 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PRDM16-203ENST00000378391 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
PRDM16-203ENST00000378391 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
PRDM16-203ENST00000378391 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
PRDM16-203ENST00000378391 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PRDM16-203ENST00000378391 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
PRDM16-203ENST00000378391 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
PRDM16-203ENST00000378391 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
PRDM16-203ENST00000378391 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
PRDM16-203ENST00000378391 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
PRDM16-203ENST00000378391 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
PRDM16-203ENST00000378391 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PRDM16-203ENST00000378391 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
PRDM16-203ENST00000378391 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PRDM16-203ENST00000378391 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PRDM16-203ENST00000378391 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
PRDM16-203ENST00000378391 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PRDM16-203ENST00000378391 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
PRDM16-203ENST00000378391 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PRDM16-203ENST00000378391 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PRDM16-203ENST00000378391 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
PRDM16-203ENST00000378391 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms