RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
ATXN2-201ENST00000377617 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
ATXN2-201ENST00000377617 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
ATXN2-201ENST00000377617 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
ATXN2-201ENST00000377617 MT1MQ8N339 61 aa5.02□□□□□ -1.61
ATXN2-201ENST00000377617 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
ATXN2-201ENST00000377617 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
ATXN2-201ENST00000377617 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
ATXN2-201ENST00000377617 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
ATXN2-201ENST00000377617 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
ATXN2-201ENST00000377617 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
ATXN2-201ENST00000377617 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
ATXN2-201ENST00000377617 MT1AP04731 61 aa4.81□□□□□ -1.64
ATXN2-201ENST00000377617 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
ATXN2-201ENST00000377617 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
ATXN2-201ENST00000377617 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
ATXN2-201ENST00000377617 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
ATXN2-201ENST00000377617 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
ATXN2-201ENST00000377617 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
ATXN2-201ENST00000377617 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
ATXN2-201ENST00000377617 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
ATXN2-201ENST00000377617 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
ATXN2-201ENST00000377617 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
ATXN2-201ENST00000377617 KMT2DO14686 5537 aa4.64□□□□□ -1.67
ATXN2-201ENST00000377617 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
ATXN2-201ENST00000377617 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
ATXN2-201ENST00000377617 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.68
ATXN2-201ENST00000377617 MT4P47944 62 aa4.53□□□□□ -1.68
ATXN2-201ENST00000377617 USH2AO75445 5202 aa4.49□□□□□ -1.69
ATXN2-201ENST00000377617 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
ATXN2-201ENST00000377617 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.7
ATXN2-201ENST00000377617 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
ATXN2-201ENST00000377617 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
ATXN2-201ENST00000377617 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
ATXN2-201ENST00000377617 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
ATXN2-201ENST00000377617 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
ATXN2-201ENST00000377617 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.73
ATXN2-201ENST00000377617 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
ATXN2-201ENST00000377617 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
ATXN2-201ENST00000377617 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
ATXN2-201ENST00000377617 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.76
ATXN2-201ENST00000377617 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
ATXN2-201ENST00000377617 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
ATXN2-201ENST00000377617 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.77
ATXN2-201ENST00000377617 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
ATXN2-201ENST00000377617 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
ATXN2-201ENST00000377617 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
ATXN2-201ENST00000377617 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
ATXN2-201ENST00000377617 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
ATXN2-201ENST00000377617 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
ATXN2-201ENST00000377617 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
ATXN2-201ENST00000377617 NEBP20929 6669 aa3.68□□□□□ -1.82
ATXN2-201ENST00000377617 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
ATXN2-201ENST00000377617 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
ATXN2-201ENST00000377617 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
ATXN2-201ENST00000377617 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
ATXN2-201ENST00000377617 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
ATXN2-201ENST00000377617 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
ATXN2-201ENST00000377617 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
ATXN2-201ENST00000377617 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
ATXN2-201ENST00000377617 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
ATXN2-201ENST00000377617 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
ATXN2-201ENST00000377617 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
ATXN2-201ENST00000377617 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
ATXN2-201ENST00000377617 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
ATXN2-201ENST00000377617 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
ATXN2-201ENST00000377617 KRTAP5-8O75690 187 aa2.59□□□□□ -2
ATXN2-201ENST00000377617 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
ATXN2-201ENST00000377617 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
ATXN2-201ENST00000377617 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
ATXN2-201ENST00000377617 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
ATXN2-201ENST00000377617 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
ATXN2-201ENST00000377617 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
ATXN2-201ENST00000377617 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
ATXN2-201ENST00000377617 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
ATXN2-201ENST00000377617 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
ATXN2-201ENST00000377617 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms