RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
TNFRSF1B-201ENST00000376259 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
TNFRSF1B-201ENST00000376259 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
TNFRSF1B-201ENST00000376259 MT1LQ93083 61 aa4.85□□□□□ -1.63
TNFRSF1B-201ENST00000376259 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
TNFRSF1B-201ENST00000376259 MT1EP04732 61 aa4.81□□□□□ -1.64
TNFRSF1B-201ENST00000376259 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
TNFRSF1B-201ENST00000376259 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
TNFRSF1B-201ENST00000376259 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
TNFRSF1B-201ENST00000376259 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
TNFRSF1B-201ENST00000376259 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
TNFRSF1B-201ENST00000376259 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
TNFRSF1B-201ENST00000376259 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
TNFRSF1B-201ENST00000376259 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TNFRSF1B-201ENST00000376259 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
TNFRSF1B-201ENST00000376259 MT1MQ8N339 61 aa4.55□□□□□ -1.68
TNFRSF1B-201ENST00000376259 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
TNFRSF1B-201ENST00000376259 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
TNFRSF1B-201ENST00000376259 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
TNFRSF1B-201ENST00000376259 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
TNFRSF1B-201ENST00000376259 SPRR2EP22531 72 aa4.28□□□□□ -1.72
TNFRSF1B-201ENST00000376259 SPRR2BP35325 72 aa4.28□□□□□ -1.72
TNFRSF1B-201ENST00000376259 SPRR2AP35326 72 aa4.28□□□□□ -1.72
TNFRSF1B-201ENST00000376259 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
TNFRSF1B-201ENST00000376259 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
TNFRSF1B-201ENST00000376259 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
TNFRSF1B-201ENST00000376259 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
TNFRSF1B-201ENST00000376259 PRM1P04553 51 aa4.16□□□□□ -1.74
TNFRSF1B-201ENST00000376259 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
TNFRSF1B-201ENST00000376259 SPRR2DP22532 72 aa4.07□□□□□ -1.76
TNFRSF1B-201ENST00000376259 MT1AP04731 61 aa4.02□□□□□ -1.77
TNFRSF1B-201ENST00000376259 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
TNFRSF1B-201ENST00000376259 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
TNFRSF1B-201ENST00000376259 MT4P47944 62 aa3.84□□□□□ -1.79
TNFRSF1B-201ENST00000376259 MT3P25713 68 aa3.81□□□□□ -1.8
TNFRSF1B-201ENST00000376259 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
TNFRSF1B-201ENST00000376259 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
TNFRSF1B-201ENST00000376259 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
TNFRSF1B-201ENST00000376259 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
TNFRSF1B-201ENST00000376259 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
TNFRSF1B-201ENST00000376259 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
TNFRSF1B-201ENST00000376259 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
TNFRSF1B-201ENST00000376259 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
TNFRSF1B-201ENST00000376259 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
TNFRSF1B-201ENST00000376259 NEBP20929 6669 aa3.52□□□□□ -1.85
TNFRSF1B-201ENST00000376259 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
TNFRSF1B-201ENST00000376259 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
TNFRSF1B-201ENST00000376259 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
TNFRSF1B-201ENST00000376259 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
TNFRSF1B-201ENST00000376259 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
TNFRSF1B-201ENST00000376259 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
TNFRSF1B-201ENST00000376259 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
TNFRSF1B-201ENST00000376259 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TNFRSF1B-201ENST00000376259 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
TNFRSF1B-201ENST00000376259 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
TNFRSF1B-201ENST00000376259 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.93
TNFRSF1B-201ENST00000376259 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
TNFRSF1B-201ENST00000376259 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
TNFRSF1B-201ENST00000376259 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
TNFRSF1B-201ENST00000376259 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
TNFRSF1B-201ENST00000376259 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
TNFRSF1B-201ENST00000376259 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
TNFRSF1B-201ENST00000376259 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
TNFRSF1B-201ENST00000376259 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
TNFRSF1B-201ENST00000376259 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
TNFRSF1B-201ENST00000376259 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
TNFRSF1B-201ENST00000376259 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
TNFRSF1B-201ENST00000376259 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
TNFRSF1B-201ENST00000376259 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
TNFRSF1B-201ENST00000376259 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
TNFRSF1B-201ENST00000376259 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
TNFRSF1B-201ENST00000376259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
TNFRSF1B-201ENST00000376259 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
TNFRSF1B-201ENST00000376259 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
TNFRSF1B-201ENST00000376259 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1B-201ENST00000376259 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
TNFRSF1B-201ENST00000376259 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 37.6 ms