RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
SRRM1-202ENST00000374389 MT1FP04733 61 aa2.28□□□□□ -2.04
SRRM1-202ENST00000374389 M0R2T5 61 aa2.27□□□□□ -2.05
SRRM1-202ENST00000374389 MT2AP02795 61 aa2.27□□□□□ -2.05
SRRM1-202ENST00000374389 NEBP20929 6669 aa2.26□□□□□ -2.05
SRRM1-202ENST00000374389 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
SRRM1-202ENST00000374389 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
SRRM1-202ENST00000374389 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
SRRM1-202ENST00000374389 TNP1P09430 55 aa2.25□□□□□ -2.05
SRRM1-202ENST00000374389 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
SRRM1-202ENST00000374389 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
SRRM1-202ENST00000374389 MT1BP07438 61 aa2.2□□□□□ -2.06
SRRM1-202ENST00000374389 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
SRRM1-202ENST00000374389 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
SRRM1-202ENST00000374389 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
SRRM1-202ENST00000374389 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
SRRM1-202ENST00000374389 MT1XP80297 61 aa2.17□□□□□ -2.06
SRRM1-202ENST00000374389 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
SRRM1-202ENST00000374389 USH2AO75445 5202 aa2.15□□□□□ -2.07
SRRM1-202ENST00000374389 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
SRRM1-202ENST00000374389 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
SRRM1-202ENST00000374389 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
SRRM1-202ENST00000374389 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
SRRM1-202ENST00000374389 KRTAP10-12P60413 245 aa2.09□□□□□ -2.08
SRRM1-202ENST00000374389 KMT2DO14686 5537 aa2.08□□□□□ -2.08
SRRM1-202ENST00000374389 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SRRM1-202ENST00000374389 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
SRRM1-202ENST00000374389 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
SRRM1-202ENST00000374389 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
SRRM1-202ENST00000374389 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
SRRM1-202ENST00000374389 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
SRRM1-202ENST00000374389 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
SRRM1-202ENST00000374389 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
SRRM1-202ENST00000374389 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
SRRM1-202ENST00000374389 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
SRRM1-202ENST00000374389 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
SRRM1-202ENST00000374389 LCE3CQ5T5A8 94 aa1.94□□□□□ -2.1
SRRM1-202ENST00000374389 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
SRRM1-202ENST00000374389 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
SRRM1-202ENST00000374389 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
SRRM1-202ENST00000374389 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.11
SRRM1-202ENST00000374389 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
SRRM1-202ENST00000374389 MT1EP04732 61 aa1.88□□□□□ -2.11
SRRM1-202ENST00000374389 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
SRRM1-202ENST00000374389 MT1LQ93083 61 aa1.87□□□□□ -2.11
SRRM1-202ENST00000374389 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
SRRM1-202ENST00000374389 MT3P25713 68 aa1.84□□□□□ -2.12
SRRM1-202ENST00000374389 MT1MQ8N339 61 aa1.75□□□□□ -2.13
SRRM1-202ENST00000374389 MT1GP13640 62 aa1.75□□□□□ -2.13
SRRM1-202ENST00000374389 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
SRRM1-202ENST00000374389 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
SRRM1-202ENST00000374389 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
SRRM1-202ENST00000374389 SPRR2FQ96RM1 72 aa1.7□□□□□ -2.14
SRRM1-202ENST00000374389 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
SRRM1-202ENST00000374389 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
SRRM1-202ENST00000374389 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SRRM1-202ENST00000374389 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
SRRM1-202ENST00000374389 SPRR2EP22531 72 aa1.62□□□□□ -2.15
SRRM1-202ENST00000374389 SPRR2BP35325 72 aa1.62□□□□□ -2.15
SRRM1-202ENST00000374389 SPRR2AP35326 72 aa1.62□□□□□ -2.15
SRRM1-202ENST00000374389 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
SRRM1-202ENST00000374389 SPRR2DP22532 72 aa1.6□□□□□ -2.15
SRRM1-202ENST00000374389 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
SRRM1-202ENST00000374389 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
SRRM1-202ENST00000374389 MT1AP04731 61 aa1.56□□□□□ -2.16
SRRM1-202ENST00000374389 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
SRRM1-202ENST00000374389 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SRRM1-202ENST00000374389 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
SRRM1-202ENST00000374389 PRM1P04553 51 aa1.4□□□□□ -2.19
SRRM1-202ENST00000374389 MT4P47944 62 aa1.32□□□□□ -2.2
SRRM1-202ENST00000374389 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
SRRM1-202ENST00000374389 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
SRRM1-202ENST00000374389 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
SRRM1-202ENST00000374389 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
SRRM1-202ENST00000374389 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SRRM1-202ENST00000374389 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
SRRM1-202ENST00000374389 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms