RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 M0R2T5 61 aa2.73□□□□□ -1.97
CHD6-202ENST00000373222 MT1HP80294 61 aa2.73□□□□□ -1.97
CHD6-202ENST00000373222 PLAC4Q8WY50 150 aa2.71□□□□□ -1.97
CHD6-202ENST00000373222 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
CHD6-202ENST00000373222 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CHD6-202ENST00000373222 MT1FP04733 61 aa2.7□□□□□ -1.98
CHD6-202ENST00000373222 USH2AO75445 5202 aa2.69□□□□□ -1.98
CHD6-202ENST00000373222 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CHD6-202ENST00000373222 MT2AP02795 61 aa2.68□□□□□ -1.98
CHD6-202ENST00000373222 SPRR2GQ9BYE4 73 aa2.67□□□□□ -1.98
CHD6-202ENST00000373222 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
CHD6-202ENST00000373222 TNP1P09430 55 aa2.65□□□□□ -1.98
CHD6-202ENST00000373222 KMT2DO14686 5537 aa2.63□□□□□ -1.99
CHD6-202ENST00000373222 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
CHD6-202ENST00000373222 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
CHD6-202ENST00000373222 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
CHD6-202ENST00000373222 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
CHD6-202ENST00000373222 MT1BP07438 61 aa2.59□□□□□ -2
CHD6-202ENST00000373222 MT1XP80297 61 aa2.57□□□□□ -2
CHD6-202ENST00000373222 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
CHD6-202ENST00000373222 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
CHD6-202ENST00000373222 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
CHD6-202ENST00000373222 FSIP2Q5CZC0 6907 aa2.5□□□□□ -2.01
CHD6-202ENST00000373222 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
CHD6-202ENST00000373222 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CHD6-202ENST00000373222 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
CHD6-202ENST00000373222 SSPOA2VEC9 5147 aa2.4□□□□□ -2.03
CHD6-202ENST00000373222 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
CHD6-202ENST00000373222 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
CHD6-202ENST00000373222 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
CHD6-202ENST00000373222 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
CHD6-202ENST00000373222 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
CHD6-202ENST00000373222 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
CHD6-202ENST00000373222 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
CHD6-202ENST00000373222 MT1EP04732 61 aa2.2□□□□□ -2.06
CHD6-202ENST00000373222 MT1LQ93083 61 aa2.2□□□□□ -2.06
CHD6-202ENST00000373222 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CHD6-202ENST00000373222 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.06
CHD6-202ENST00000373222 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
CHD6-202ENST00000373222 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
CHD6-202ENST00000373222 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
CHD6-202ENST00000373222 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 MT1GP13640 62 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
CHD6-202ENST00000373222 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
CHD6-202ENST00000373222 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
CHD6-202ENST00000373222 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
CHD6-202ENST00000373222 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
CHD6-202ENST00000373222 MT1MQ8N339 61 aa2.06□□□□□ -2.08
CHD6-202ENST00000373222 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
CHD6-202ENST00000373222 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
CHD6-202ENST00000373222 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
CHD6-202ENST00000373222 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CHD6-202ENST00000373222 SPRR2EP22531 72 aa1.85□□□□□ -2.11
CHD6-202ENST00000373222 SPRR2BP35325 72 aa1.85□□□□□ -2.11
CHD6-202ENST00000373222 SPRR2AP35326 72 aa1.85□□□□□ -2.11
CHD6-202ENST00000373222 MT1AP04731 61 aa1.81□□□□□ -2.12
CHD6-202ENST00000373222 SPRR2DP22532 72 aa1.77□□□□□ -2.13
CHD6-202ENST00000373222 NEBP20929 6669 aa1.75□□□□□ -2.13
CHD6-202ENST00000373222 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
CHD6-202ENST00000373222 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
CHD6-202ENST00000373222 PRM1P04553 51 aa1.69□□□□□ -2.14
CHD6-202ENST00000373222 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.14
CHD6-202ENST00000373222 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
CHD6-202ENST00000373222 MT4P47944 62 aa1.61□□□□□ -2.15
CHD6-202ENST00000373222 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CHD6-202ENST00000373222 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
CHD6-202ENST00000373222 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
CHD6-202ENST00000373222 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CHD6-202ENST00000373222 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
CHD6-202ENST00000373222 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
CHD6-202ENST00000373222 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
CHD6-202ENST00000373222 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
CHD6-202ENST00000373222 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms