RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
PFDN4-201ENST00000371419 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
PFDN4-201ENST00000371419 KMT2DO14686 5537 aa6.33□□□□□ -1.4
PFDN4-201ENST00000371419 TNP1P09430 55 aa6.33□□□□□ -1.4
PFDN4-201ENST00000371419 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
PFDN4-201ENST00000371419 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
PFDN4-201ENST00000371419 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
PFDN4-201ENST00000371419 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
PFDN4-201ENST00000371419 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
PFDN4-201ENST00000371419 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
PFDN4-201ENST00000371419 NEBP20929 6669 aa6.17□□□□□ -1.42
PFDN4-201ENST00000371419 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
PFDN4-201ENST00000371419 SPRR2EP22531 72 aa6.02□□□□□ -1.44
PFDN4-201ENST00000371419 SPRR2BP35325 72 aa6.02□□□□□ -1.44
PFDN4-201ENST00000371419 SPRR2AP35326 72 aa6.02□□□□□ -1.44
PFDN4-201ENST00000371419 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
PFDN4-201ENST00000371419 LCE3AQ5TA76 89 aa5.96□□□□□ -1.45
PFDN4-201ENST00000371419 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
PFDN4-201ENST00000371419 MT1EP04732 61 aa5.9□□□□□ -1.47
PFDN4-201ENST00000371419 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
PFDN4-201ENST00000371419 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
PFDN4-201ENST00000371419 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
PFDN4-201ENST00000371419 SPRR2DP22532 72 aa5.83□□□□□ -1.48
PFDN4-201ENST00000371419 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
PFDN4-201ENST00000371419 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
PFDN4-201ENST00000371419 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
PFDN4-201ENST00000371419 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
PFDN4-201ENST00000371419 MT1GP13640 62 aa5.69□□□□□ -1.5
PFDN4-201ENST00000371419 MT1LQ93083 61 aa5.69□□□□□ -1.5
PFDN4-201ENST00000371419 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
PFDN4-201ENST00000371419 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
PFDN4-201ENST00000371419 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
PFDN4-201ENST00000371419 MT1MQ8N339 61 aa5.58□□□□□ -1.52
PFDN4-201ENST00000371419 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
PFDN4-201ENST00000371419 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
PFDN4-201ENST00000371419 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
PFDN4-201ENST00000371419 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
PFDN4-201ENST00000371419 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
PFDN4-201ENST00000371419 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
PFDN4-201ENST00000371419 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
PFDN4-201ENST00000371419 MT4P47944 62 aa5.06□□□□□ -1.6
PFDN4-201ENST00000371419 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
PFDN4-201ENST00000371419 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
PFDN4-201ENST00000371419 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.99□□□□□ -1.61
PFDN4-201ENST00000371419 MT3P25713 68 aa4.91□□□□□ -1.62
PFDN4-201ENST00000371419 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
PFDN4-201ENST00000371419 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
PFDN4-201ENST00000371419 MT1AP04731 61 aa4.84□□□□□ -1.63
PFDN4-201ENST00000371419 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
PFDN4-201ENST00000371419 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
PFDN4-201ENST00000371419 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
PFDN4-201ENST00000371419 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
PFDN4-201ENST00000371419 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.66
PFDN4-201ENST00000371419 INE1O15225 51 aa4.6□□□□□ -1.67
PFDN4-201ENST00000371419 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
PFDN4-201ENST00000371419 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
PFDN4-201ENST00000371419 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
PFDN4-201ENST00000371419 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
PFDN4-201ENST00000371419 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
PFDN4-201ENST00000371419 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
PFDN4-201ENST00000371419 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
PFDN4-201ENST00000371419 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
PFDN4-201ENST00000371419 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
PFDN4-201ENST00000371419 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
PFDN4-201ENST00000371419 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
PFDN4-201ENST00000371419 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
PFDN4-201ENST00000371419 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
PFDN4-201ENST00000371419 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
PFDN4-201ENST00000371419 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
PFDN4-201ENST00000371419 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
PFDN4-201ENST00000371419 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
PFDN4-201ENST00000371419 PRM1P04553 51 aa3.54□□□□□ -1.84
PFDN4-201ENST00000371419 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
PFDN4-201ENST00000371419 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
PFDN4-201ENST00000371419 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
PFDN4-201ENST00000371419 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PFDN4-201ENST00000371419 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms