RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PRM1P04553 51 aa5.23□□□□□ -1.57
PTP4A1-201ENST00000370651 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
PTP4A1-201ENST00000370651 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
PTP4A1-201ENST00000370651 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
PTP4A1-201ENST00000370651 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
PTP4A1-201ENST00000370651 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
PTP4A1-201ENST00000370651 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
PTP4A1-201ENST00000370651 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
PTP4A1-201ENST00000370651 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
PTP4A1-201ENST00000370651 MT3P25713 68 aa5.13□□□□□ -1.59
PTP4A1-201ENST00000370651 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
PTP4A1-201ENST00000370651 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
PTP4A1-201ENST00000370651 MUC2Q02817 5179 aa4.99□□□□□ -1.61
PTP4A1-201ENST00000370651 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-201ENST00000370651 MT1AP04731 61 aa4.96□□□□□ -1.62
PTP4A1-201ENST00000370651 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
PTP4A1-201ENST00000370651 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
PTP4A1-201ENST00000370651 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
PTP4A1-201ENST00000370651 MT4P47944 62 aa4.83□□□□□ -1.64
PTP4A1-201ENST00000370651 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
PTP4A1-201ENST00000370651 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
PTP4A1-201ENST00000370651 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
PTP4A1-201ENST00000370651 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
PTP4A1-201ENST00000370651 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
PTP4A1-201ENST00000370651 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
PTP4A1-201ENST00000370651 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
PTP4A1-201ENST00000370651 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
PTP4A1-201ENST00000370651 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
PTP4A1-201ENST00000370651 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
PTP4A1-201ENST00000370651 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
PTP4A1-201ENST00000370651 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
PTP4A1-201ENST00000370651 USH2AO75445 5202 aa4.46□□□□□ -1.7
PTP4A1-201ENST00000370651 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
PTP4A1-201ENST00000370651 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
PTP4A1-201ENST00000370651 KMT2DO14686 5537 aa4.27□□□□□ -1.73
PTP4A1-201ENST00000370651 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
PTP4A1-201ENST00000370651 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
PTP4A1-201ENST00000370651 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
PTP4A1-201ENST00000370651 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-201ENST00000370651 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.76
PTP4A1-201ENST00000370651 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
PTP4A1-201ENST00000370651 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-201ENST00000370651 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
PTP4A1-201ENST00000370651 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
PTP4A1-201ENST00000370651 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
PTP4A1-201ENST00000370651 LCE1FQ5T754 118 aa3.9□□□□□ -1.78
PTP4A1-201ENST00000370651 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
PTP4A1-201ENST00000370651 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
PTP4A1-201ENST00000370651 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
PTP4A1-201ENST00000370651 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
PTP4A1-201ENST00000370651 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
PTP4A1-201ENST00000370651 NEBP20929 6669 aa3.71□□□□□ -1.82
PTP4A1-201ENST00000370651 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
PTP4A1-201ENST00000370651 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
PTP4A1-201ENST00000370651 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
PTP4A1-201ENST00000370651 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
PTP4A1-201ENST00000370651 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
PTP4A1-201ENST00000370651 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
PTP4A1-201ENST00000370651 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
PTP4A1-201ENST00000370651 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
PTP4A1-201ENST00000370651 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
PTP4A1-201ENST00000370651 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
PTP4A1-201ENST00000370651 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
PTP4A1-201ENST00000370651 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
PTP4A1-201ENST00000370651 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
PTP4A1-201ENST00000370651 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
PTP4A1-201ENST00000370651 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PTP4A1-201ENST00000370651 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
PTP4A1-201ENST00000370651 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
PTP4A1-201ENST00000370651 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
PTP4A1-201ENST00000370651 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
PTP4A1-201ENST00000370651 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
PTP4A1-201ENST00000370651 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
PTP4A1-201ENST00000370651 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
PTP4A1-201ENST00000370651 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
PTP4A1-201ENST00000370651 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PTP4A1-201ENST00000370651 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 14.2 ms