RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
LRIF1-201ENST00000369763 MT1EP04732 61 aa3.7□□□□□ -1.82
LRIF1-201ENST00000369763 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
LRIF1-201ENST00000369763 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
LRIF1-201ENST00000369763 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
LRIF1-201ENST00000369763 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
LRIF1-201ENST00000369763 MT1GP13640 62 aa3.64□□□□□ -1.83
LRIF1-201ENST00000369763 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
LRIF1-201ENST00000369763 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
LRIF1-201ENST00000369763 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
LRIF1-201ENST00000369763 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
LRIF1-201ENST00000369763 MT1MQ8N339 61 aa3.46□□□□□ -1.85
LRIF1-201ENST00000369763 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
LRIF1-201ENST00000369763 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
LRIF1-201ENST00000369763 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
LRIF1-201ENST00000369763 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
LRIF1-201ENST00000369763 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
LRIF1-201ENST00000369763 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
LRIF1-201ENST00000369763 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
LRIF1-201ENST00000369763 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
LRIF1-201ENST00000369763 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
LRIF1-201ENST00000369763 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
LRIF1-201ENST00000369763 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
LRIF1-201ENST00000369763 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
LRIF1-201ENST00000369763 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
LRIF1-201ENST00000369763 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
LRIF1-201ENST00000369763 SPRR2EP22531 72 aa3.06□□□□□ -1.92
LRIF1-201ENST00000369763 SPRR2BP35325 72 aa3.06□□□□□ -1.92
LRIF1-201ENST00000369763 SPRR2AP35326 72 aa3.06□□□□□ -1.92
LRIF1-201ENST00000369763 MT1AP04731 61 aa3.06□□□□□ -1.92
LRIF1-201ENST00000369763 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
LRIF1-201ENST00000369763 PRM1P04553 51 aa3.05□□□□□ -1.92
LRIF1-201ENST00000369763 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
LRIF1-201ENST00000369763 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
LRIF1-201ENST00000369763 SPRR2DP22532 72 aa2.91□□□□□ -1.94
LRIF1-201ENST00000369763 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
LRIF1-201ENST00000369763 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
LRIF1-201ENST00000369763 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
LRIF1-201ENST00000369763 MT3P25713 68 aa2.77□□□□□ -1.97
LRIF1-201ENST00000369763 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
LRIF1-201ENST00000369763 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
LRIF1-201ENST00000369763 MT4P47944 62 aa2.72□□□□□ -1.97
LRIF1-201ENST00000369763 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
LRIF1-201ENST00000369763 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
LRIF1-201ENST00000369763 NEBP20929 6669 aa2.6□□□□□ -1.99
LRIF1-201ENST00000369763 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
LRIF1-201ENST00000369763 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
LRIF1-201ENST00000369763 LCE1DQ5T752 114 aa2.54□□□□□ -2
LRIF1-201ENST00000369763 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
LRIF1-201ENST00000369763 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
LRIF1-201ENST00000369763 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
LRIF1-201ENST00000369763 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
LRIF1-201ENST00000369763 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
LRIF1-201ENST00000369763 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
LRIF1-201ENST00000369763 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
LRIF1-201ENST00000369763 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
LRIF1-201ENST00000369763 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
LRIF1-201ENST00000369763 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
LRIF1-201ENST00000369763 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
LRIF1-201ENST00000369763 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
LRIF1-201ENST00000369763 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
LRIF1-201ENST00000369763 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
LRIF1-201ENST00000369763 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
LRIF1-201ENST00000369763 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
LRIF1-201ENST00000369763 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
LRIF1-201ENST00000369763 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
LRIF1-201ENST00000369763 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
LRIF1-201ENST00000369763 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
LRIF1-201ENST00000369763 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
LRIF1-201ENST00000369763 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
LRIF1-201ENST00000369763 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
LRIF1-201ENST00000369763 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
LRIF1-201ENST00000369763 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
LRIF1-201ENST00000369763 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
LRIF1-201ENST00000369763 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
LRIF1-201ENST00000369763 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
LRIF1-201ENST00000369763 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 61.8 ms