RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
PSMD4-201ENST00000368881 NEBP20929 6669 aa6.28□□□□□ -1.4
PSMD4-201ENST00000368881 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
PSMD4-201ENST00000368881 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
PSMD4-201ENST00000368881 MT1GP13640 62 aa6.21□□□□□ -1.42
PSMD4-201ENST00000368881 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
PSMD4-201ENST00000368881 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
PSMD4-201ENST00000368881 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
PSMD4-201ENST00000368881 MT1MQ8N339 61 aa6.06□□□□□ -1.44
PSMD4-201ENST00000368881 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
PSMD4-201ENST00000368881 SPRR2EP22531 72 aa6.01□□□□□ -1.45
PSMD4-201ENST00000368881 SPRR2BP35325 72 aa6.01□□□□□ -1.45
PSMD4-201ENST00000368881 SPRR2AP35326 72 aa6.01□□□□□ -1.45
PSMD4-201ENST00000368881 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
PSMD4-201ENST00000368881 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PSMD4-201ENST00000368881 H3BS24 57 aa5.92□□□□□ -1.46
PSMD4-201ENST00000368881 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
PSMD4-201ENST00000368881 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
PSMD4-201ENST00000368881 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
PSMD4-201ENST00000368881 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
PSMD4-201ENST00000368881 SPRR2DP22532 72 aa5.8□□□□□ -1.48
PSMD4-201ENST00000368881 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
PSMD4-201ENST00000368881 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
PSMD4-201ENST00000368881 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
PSMD4-201ENST00000368881 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
PSMD4-201ENST00000368881 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
PSMD4-201ENST00000368881 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
PSMD4-201ENST00000368881 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
PSMD4-201ENST00000368881 MT1AP04731 61 aa5.42□□□□□ -1.54
PSMD4-201ENST00000368881 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
PSMD4-201ENST00000368881 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
PSMD4-201ENST00000368881 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
PSMD4-201ENST00000368881 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
PSMD4-201ENST00000368881 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
PSMD4-201ENST00000368881 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
PSMD4-201ENST00000368881 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
PSMD4-201ENST00000368881 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
PSMD4-201ENST00000368881 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
PSMD4-201ENST00000368881 INE1O15225 51 aa5.01□□□□□ -1.61
PSMD4-201ENST00000368881 MT4P47944 62 aa4.97□□□□□ -1.61
PSMD4-201ENST00000368881 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
PSMD4-201ENST00000368881 MT3P25713 68 aa4.94□□□□□ -1.62
PSMD4-201ENST00000368881 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
PSMD4-201ENST00000368881 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
PSMD4-201ENST00000368881 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
PSMD4-201ENST00000368881 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
PSMD4-201ENST00000368881 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
PSMD4-201ENST00000368881 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
PSMD4-201ENST00000368881 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
PSMD4-201ENST00000368881 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
PSMD4-201ENST00000368881 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
PSMD4-201ENST00000368881 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
PSMD4-201ENST00000368881 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
PSMD4-201ENST00000368881 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
PSMD4-201ENST00000368881 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
PSMD4-201ENST00000368881 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
PSMD4-201ENST00000368881 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
PSMD4-201ENST00000368881 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
PSMD4-201ENST00000368881 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
PSMD4-201ENST00000368881 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
PSMD4-201ENST00000368881 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
PSMD4-201ENST00000368881 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PSMD4-201ENST00000368881 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
PSMD4-201ENST00000368881 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
PSMD4-201ENST00000368881 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
PSMD4-201ENST00000368881 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
PSMD4-201ENST00000368881 PRM1P04553 51 aa3.95□□□□□ -1.78
PSMD4-201ENST00000368881 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
PSMD4-201ENST00000368881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
PSMD4-201ENST00000368881 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
PSMD4-201ENST00000368881 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.85
PSMD4-201ENST00000368881 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
PSMD4-201ENST00000368881 PHGR1C9JFL3 82 aa3□□□□□ -1.93
PSMD4-201ENST00000368881 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PSMD4-201ENST00000368881 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
PSMD4-201ENST00000368881 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
PSMD4-201ENST00000368881 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 86.6 ms