RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
C1orf43-206ENST00000368521 KMT2DO14686 5537 aa5.28□□□□□ -1.56
C1orf43-206ENST00000368521 MT1EP04732 61 aa5.28□□□□□ -1.56
C1orf43-206ENST00000368521 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
C1orf43-206ENST00000368521 MT1LQ93083 61 aa5.24□□□□□ -1.57
C1orf43-206ENST00000368521 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.57
C1orf43-206ENST00000368521 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
C1orf43-206ENST00000368521 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
C1orf43-206ENST00000368521 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.58
C1orf43-206ENST00000368521 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
C1orf43-206ENST00000368521 INE1O15225 51 aa5.06□□□□□ -1.6
C1orf43-206ENST00000368521 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
C1orf43-206ENST00000368521 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
C1orf43-206ENST00000368521 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
C1orf43-206ENST00000368521 MT1GP13640 62 aa5.02□□□□□ -1.61
C1orf43-206ENST00000368521 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
C1orf43-206ENST00000368521 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
C1orf43-206ENST00000368521 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
C1orf43-206ENST00000368521 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
C1orf43-206ENST00000368521 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
C1orf43-206ENST00000368521 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
C1orf43-206ENST00000368521 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
C1orf43-206ENST00000368521 MT1MQ8N339 61 aa4.94□□□□□ -1.62
C1orf43-206ENST00000368521 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
C1orf43-206ENST00000368521 SPRR2FQ96RM1 72 aa4.88□□□□□ -1.63
C1orf43-206ENST00000368521 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
C1orf43-206ENST00000368521 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
C1orf43-206ENST00000368521 NEBP20929 6669 aa4.8□□□□□ -1.64
C1orf43-206ENST00000368521 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
C1orf43-206ENST00000368521 SPRR2EP22531 72 aa4.72□□□□□ -1.65
C1orf43-206ENST00000368521 SPRR2BP35325 72 aa4.72□□□□□ -1.65
C1orf43-206ENST00000368521 SPRR2AP35326 72 aa4.72□□□□□ -1.65
C1orf43-206ENST00000368521 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
C1orf43-206ENST00000368521 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
C1orf43-206ENST00000368521 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
C1orf43-206ENST00000368521 SPRR2DP22532 72 aa4.56□□□□□ -1.68
C1orf43-206ENST00000368521 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
C1orf43-206ENST00000368521 MT1AP04731 61 aa4.47□□□□□ -1.69
C1orf43-206ENST00000368521 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
C1orf43-206ENST00000368521 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
C1orf43-206ENST00000368521 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
C1orf43-206ENST00000368521 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
C1orf43-206ENST00000368521 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
C1orf43-206ENST00000368521 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
C1orf43-206ENST00000368521 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
C1orf43-206ENST00000368521 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
C1orf43-206ENST00000368521 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
C1orf43-206ENST00000368521 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
C1orf43-206ENST00000368521 MT3P25713 68 aa4.03□□□□□ -1.76
C1orf43-206ENST00000368521 MT4P47944 62 aa3.98□□□□□ -1.77
C1orf43-206ENST00000368521 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
C1orf43-206ENST00000368521 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
C1orf43-206ENST00000368521 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
C1orf43-206ENST00000368521 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
C1orf43-206ENST00000368521 PRM1P04553 51 aa3.7□□□□□ -1.82
C1orf43-206ENST00000368521 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
C1orf43-206ENST00000368521 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
C1orf43-206ENST00000368521 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
C1orf43-206ENST00000368521 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
C1orf43-206ENST00000368521 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
C1orf43-206ENST00000368521 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
C1orf43-206ENST00000368521 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
C1orf43-206ENST00000368521 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
C1orf43-206ENST00000368521 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
C1orf43-206ENST00000368521 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
C1orf43-206ENST00000368521 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
C1orf43-206ENST00000368521 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
C1orf43-206ENST00000368521 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
C1orf43-206ENST00000368521 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
C1orf43-206ENST00000368521 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
C1orf43-206ENST00000368521 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
C1orf43-206ENST00000368521 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
C1orf43-206ENST00000368521 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
C1orf43-206ENST00000368521 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
C1orf43-206ENST00000368521 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
C1orf43-206ENST00000368521 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
C1orf43-206ENST00000368521 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms