RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 MT1GP13640 62 aa4.85□□□□□ -1.63
SHC1-205ENST00000368453 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SHC1-205ENST00000368453 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
SHC1-205ENST00000368453 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
SHC1-205ENST00000368453 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
SHC1-205ENST00000368453 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
SHC1-205ENST00000368453 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
SHC1-205ENST00000368453 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
SHC1-205ENST00000368453 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
SHC1-205ENST00000368453 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SHC1-205ENST00000368453 MT1MQ8N339 61 aa4.57□□□□□ -1.68
SHC1-205ENST00000368453 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SHC1-205ENST00000368453 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
SHC1-205ENST00000368453 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
SHC1-205ENST00000368453 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
SHC1-205ENST00000368453 PRM1P04553 51 aa4.44□□□□□ -1.7
SHC1-205ENST00000368453 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
SHC1-205ENST00000368453 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
SHC1-205ENST00000368453 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
SHC1-205ENST00000368453 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
SHC1-205ENST00000368453 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
SHC1-205ENST00000368453 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
SHC1-205ENST00000368453 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SHC1-205ENST00000368453 MT1AP04731 61 aa4.28□□□□□ -1.72
SHC1-205ENST00000368453 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SHC1-205ENST00000368453 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
SHC1-205ENST00000368453 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
SHC1-205ENST00000368453 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
SHC1-205ENST00000368453 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
SHC1-205ENST00000368453 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
SHC1-205ENST00000368453 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
SHC1-205ENST00000368453 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SHC1-205ENST00000368453 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
SHC1-205ENST00000368453 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
SHC1-205ENST00000368453 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
SHC1-205ENST00000368453 SPRR2EP22531 72 aa3.74□□□□□ -1.81
SHC1-205ENST00000368453 MT3P25713 68 aa3.74□□□□□ -1.81
SHC1-205ENST00000368453 SPRR2BP35325 72 aa3.74□□□□□ -1.81
SHC1-205ENST00000368453 SPRR2AP35326 72 aa3.74□□□□□ -1.81
SHC1-205ENST00000368453 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SHC1-205ENST00000368453 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SHC1-205ENST00000368453 SPRR2DP22532 72 aa3.54□□□□□ -1.84
SHC1-205ENST00000368453 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
SHC1-205ENST00000368453 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SHC1-205ENST00000368453 NEBP20929 6669 aa3.34□□□□□ -1.88
SHC1-205ENST00000368453 MT4P47944 62 aa3.27□□□□□ -1.89
SHC1-205ENST00000368453 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SHC1-205ENST00000368453 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SHC1-205ENST00000368453 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
SHC1-205ENST00000368453 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SHC1-205ENST00000368453 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.9
SHC1-205ENST00000368453 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SHC1-205ENST00000368453 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SHC1-205ENST00000368453 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
SHC1-205ENST00000368453 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
SHC1-205ENST00000368453 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SHC1-205ENST00000368453 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
SHC1-205ENST00000368453 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.93
SHC1-205ENST00000368453 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
SHC1-205ENST00000368453 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SHC1-205ENST00000368453 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
SHC1-205ENST00000368453 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
SHC1-205ENST00000368453 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SHC1-205ENST00000368453 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
SHC1-205ENST00000368453 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
SHC1-205ENST00000368453 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SHC1-205ENST00000368453 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SHC1-205ENST00000368453 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SHC1-205ENST00000368453 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
SHC1-205ENST00000368453 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
SHC1-205ENST00000368453 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
SHC1-205ENST00000368453 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SHC1-205ENST00000368453 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SHC1-205ENST00000368453 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SHC1-205ENST00000368453 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
SHC1-205ENST00000368453 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
SHC1-205ENST00000368453 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 136.5 ms