RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
SMG5-201ENST00000361813 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
SMG5-201ENST00000361813 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
SMG5-201ENST00000361813 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
SMG5-201ENST00000361813 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
SMG5-201ENST00000361813 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
SMG5-201ENST00000361813 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
SMG5-201ENST00000361813 MT1MQ8N339 61 aa5.54□□□□□ -1.52
SMG5-201ENST00000361813 SPRR2EP22531 72 aa5.52□□□□□ -1.53
SMG5-201ENST00000361813 SPRR2BP35325 72 aa5.52□□□□□ -1.53
SMG5-201ENST00000361813 SPRR2AP35326 72 aa5.52□□□□□ -1.53
SMG5-201ENST00000361813 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
SMG5-201ENST00000361813 PRM1P04553 51 aa5.38□□□□□ -1.55
SMG5-201ENST00000361813 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SMG5-201ENST00000361813 KMT2DO14686 5537 aa5.34□□□□□ -1.55
SMG5-201ENST00000361813 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
SMG5-201ENST00000361813 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
SMG5-201ENST00000361813 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SMG5-201ENST00000361813 SPRR2DP22532 72 aa5.29□□□□□ -1.56
SMG5-201ENST00000361813 USH2AO75445 5202 aa5.29□□□□□ -1.56
SMG5-201ENST00000361813 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
SMG5-201ENST00000361813 MT3P25713 68 aa5.09□□□□□ -1.59
SMG5-201ENST00000361813 MT1AP04731 61 aa5.09□□□□□ -1.59
SMG5-201ENST00000361813 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
SMG5-201ENST00000361813 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
SMG5-201ENST00000361813 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
SMG5-201ENST00000361813 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
SMG5-201ENST00000361813 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
SMG5-201ENST00000361813 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
SMG5-201ENST00000361813 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
SMG5-201ENST00000361813 MT4P47944 62 aa4.81□□□□□ -1.64
SMG5-201ENST00000361813 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
SMG5-201ENST00000361813 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
SMG5-201ENST00000361813 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
SMG5-201ENST00000361813 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
SMG5-201ENST00000361813 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
SMG5-201ENST00000361813 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
SMG5-201ENST00000361813 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
SMG5-201ENST00000361813 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SMG5-201ENST00000361813 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
SMG5-201ENST00000361813 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
SMG5-201ENST00000361813 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
SMG5-201ENST00000361813 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
SMG5-201ENST00000361813 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
SMG5-201ENST00000361813 LCE4AQ5TA78 99 aa4.09□□□□□ -1.76
SMG5-201ENST00000361813 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
SMG5-201ENST00000361813 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
SMG5-201ENST00000361813 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SMG5-201ENST00000361813 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
SMG5-201ENST00000361813 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
SMG5-201ENST00000361813 NEBP20929 6669 aa3.79□□□□□ -1.8
SMG5-201ENST00000361813 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
SMG5-201ENST00000361813 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SMG5-201ENST00000361813 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SMG5-201ENST00000361813 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
SMG5-201ENST00000361813 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SMG5-201ENST00000361813 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SMG5-201ENST00000361813 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
SMG5-201ENST00000361813 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
SMG5-201ENST00000361813 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
SMG5-201ENST00000361813 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
SMG5-201ENST00000361813 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
SMG5-201ENST00000361813 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
SMG5-201ENST00000361813 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SMG5-201ENST00000361813 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SMG5-201ENST00000361813 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
SMG5-201ENST00000361813 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
SMG5-201ENST00000361813 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
SMG5-201ENST00000361813 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SMG5-201ENST00000361813 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
SMG5-201ENST00000361813 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
SMG5-201ENST00000361813 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
SMG5-201ENST00000361813 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SMG5-201ENST00000361813 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
SMG5-201ENST00000361813 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SMG5-201ENST00000361813 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
SMG5-201ENST00000361813 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 58.5 ms