RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SPRR2FQ96RM1 72 aa7.63□□□□□ -1.19
MAP1LC3A-201ENST00000360668 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
MAP1LC3A-201ENST00000360668 KRTAP20-1Q3LI63 56 aa7.53□□□□□ -1.2
MAP1LC3A-201ENST00000360668 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
MAP1LC3A-201ENST00000360668 SPRR2EP22531 72 aa7.5□□□□□ -1.21
MAP1LC3A-201ENST00000360668 SPRR2BP35325 72 aa7.5□□□□□ -1.21
MAP1LC3A-201ENST00000360668 SPRR2AP35326 72 aa7.5□□□□□ -1.21
MAP1LC3A-201ENST00000360668 MT1LQ93083 61 aa7.47□□□□□ -1.21
MAP1LC3A-201ENST00000360668 LUZP6Q538Z0 58 aa7.46□□□□□ -1.21
MAP1LC3A-201ENST00000360668 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
MAP1LC3A-201ENST00000360668 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
MAP1LC3A-201ENST00000360668 KRTAP2-3P0C7H8 128 aa7.37□□□□□ -1.23
MAP1LC3A-201ENST00000360668 KRTAP2-4Q9BYR9 128 aa7.37□□□□□ -1.23
MAP1LC3A-201ENST00000360668 LCE3CQ5T5A8 94 aa7.36□□□□□ -1.23
MAP1LC3A-201ENST00000360668 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
MAP1LC3A-201ENST00000360668 MT1GP13640 62 aa7.29□□□□□ -1.24
MAP1LC3A-201ENST00000360668 SPRR2DP22532 72 aa7.25□□□□□ -1.25
MAP1LC3A-201ENST00000360668 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
MAP1LC3A-201ENST00000360668 MT1MQ8N339 61 aa7.19□□□□□ -1.26
MAP1LC3A-201ENST00000360668 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
MAP1LC3A-201ENST00000360668 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.27
MAP1LC3A-201ENST00000360668 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.27
MAP1LC3A-201ENST00000360668 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
MAP1LC3A-201ENST00000360668 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
MAP1LC3A-201ENST00000360668 KRTAP9-6A8MVA2 160 aa6.94□□□□□ -1.3
MAP1LC3A-201ENST00000360668 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3A-201ENST00000360668 H3BS24 57 aa6.78□□□□□ -1.32
MAP1LC3A-201ENST00000360668 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
MAP1LC3A-201ENST00000360668 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
MAP1LC3A-201ENST00000360668 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
MAP1LC3A-201ENST00000360668 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
MAP1LC3A-201ENST00000360668 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
MAP1LC3A-201ENST00000360668 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
MAP1LC3A-201ENST00000360668 MT1AP04731 61 aa6.36□□□□□ -1.39
MAP1LC3A-201ENST00000360668 MT4P47944 62 aa6.34□□□□□ -1.39
MAP1LC3A-201ENST00000360668 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
MAP1LC3A-201ENST00000360668 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
MAP1LC3A-201ENST00000360668 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
MAP1LC3A-201ENST00000360668 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
MAP1LC3A-201ENST00000360668 INE1O15225 51 aa6.2□□□□□ -1.42
MAP1LC3A-201ENST00000360668 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
MAP1LC3A-201ENST00000360668 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
MAP1LC3A-201ENST00000360668 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
MAP1LC3A-201ENST00000360668 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
MAP1LC3A-201ENST00000360668 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
MAP1LC3A-201ENST00000360668 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
MAP1LC3A-201ENST00000360668 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
MAP1LC3A-201ENST00000360668 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
MAP1LC3A-201ENST00000360668 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
MAP1LC3A-201ENST00000360668 MT3P25713 68 aa5.77□□□□□ -1.49
MAP1LC3A-201ENST00000360668 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
MAP1LC3A-201ENST00000360668 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
MAP1LC3A-201ENST00000360668 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
MAP1LC3A-201ENST00000360668 LCE3EQ5T5B0 92 aa5.45□□□□□ -1.54
MAP1LC3A-201ENST00000360668 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
MAP1LC3A-201ENST00000360668 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
MAP1LC3A-201ENST00000360668 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.57
MAP1LC3A-201ENST00000360668 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
MAP1LC3A-201ENST00000360668 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
MAP1LC3A-201ENST00000360668 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
MAP1LC3A-201ENST00000360668 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
MAP1LC3A-201ENST00000360668 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
MAP1LC3A-201ENST00000360668 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
MAP1LC3A-201ENST00000360668 PRM1P04553 51 aa4.78□□□□□ -1.64
MAP1LC3A-201ENST00000360668 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
MAP1LC3A-201ENST00000360668 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
MAP1LC3A-201ENST00000360668 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
MAP1LC3A-201ENST00000360668 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
MAP1LC3A-201ENST00000360668 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
MAP1LC3A-201ENST00000360668 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
MAP1LC3A-201ENST00000360668 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
MAP1LC3A-201ENST00000360668 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
MAP1LC3A-201ENST00000360668 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
MAP1LC3A-201ENST00000360668 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
MAP1LC3A-201ENST00000360668 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
MAP1LC3A-201ENST00000360668 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
MAP1LC3A-201ENST00000360668 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms