RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
SNX11-201ENST00000359238 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
SNX11-201ENST00000359238 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
SNX11-201ENST00000359238 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
SNX11-201ENST00000359238 MT1LQ93083 61 aa6.48□□□□□ -1.37
SNX11-201ENST00000359238 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
SNX11-201ENST00000359238 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
SNX11-201ENST00000359238 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
SNX11-201ENST00000359238 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
SNX11-201ENST00000359238 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
SNX11-201ENST00000359238 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
SNX11-201ENST00000359238 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
SNX11-201ENST00000359238 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
SNX11-201ENST00000359238 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
SNX11-201ENST00000359238 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
SNX11-201ENST00000359238 MT1GP13640 62 aa6.2□□□□□ -1.42
SNX11-201ENST00000359238 MT1MQ8N339 61 aa6.19□□□□□ -1.42
SNX11-201ENST00000359238 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
SNX11-201ENST00000359238 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SNX11-201ENST00000359238 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
SNX11-201ENST00000359238 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
SNX11-201ENST00000359238 SPRR2EP22531 72 aa6.08□□□□□ -1.44
SNX11-201ENST00000359238 SPRR2BP35325 72 aa6.08□□□□□ -1.44
SNX11-201ENST00000359238 SPRR2AP35326 72 aa6.08□□□□□ -1.44
SNX11-201ENST00000359238 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
SNX11-201ENST00000359238 SPRR2DP22532 72 aa5.85□□□□□ -1.47
SNX11-201ENST00000359238 NEBP20929 6669 aa5.83□□□□□ -1.48
SNX11-201ENST00000359238 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
SNX11-201ENST00000359238 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SNX11-201ENST00000359238 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
SNX11-201ENST00000359238 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
SNX11-201ENST00000359238 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SNX11-201ENST00000359238 MT1AP04731 61 aa5.43□□□□□ -1.54
SNX11-201ENST00000359238 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
SNX11-201ENST00000359238 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
SNX11-201ENST00000359238 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
SNX11-201ENST00000359238 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
SNX11-201ENST00000359238 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
SNX11-201ENST00000359238 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SNX11-201ENST00000359238 PRM1P04553 51 aa5.22□□□□□ -1.57
SNX11-201ENST00000359238 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
SNX11-201ENST00000359238 MT4P47944 62 aa5.14□□□□□ -1.59
SNX11-201ENST00000359238 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
SNX11-201ENST00000359238 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
SNX11-201ENST00000359238 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
SNX11-201ENST00000359238 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
SNX11-201ENST00000359238 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
SNX11-201ENST00000359238 LCE1DQ5T752 114 aa5□□□□□ -1.61
SNX11-201ENST00000359238 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
SNX11-201ENST00000359238 MT3P25713 68 aa4.91□□□□□ -1.62
SNX11-201ENST00000359238 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SNX11-201ENST00000359238 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
SNX11-201ENST00000359238 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
SNX11-201ENST00000359238 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
SNX11-201ENST00000359238 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SNX11-201ENST00000359238 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
SNX11-201ENST00000359238 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
SNX11-201ENST00000359238 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
SNX11-201ENST00000359238 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SNX11-201ENST00000359238 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
SNX11-201ENST00000359238 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
SNX11-201ENST00000359238 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SNX11-201ENST00000359238 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
SNX11-201ENST00000359238 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
SNX11-201ENST00000359238 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
SNX11-201ENST00000359238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
SNX11-201ENST00000359238 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SNX11-201ENST00000359238 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
SNX11-201ENST00000359238 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
SNX11-201ENST00000359238 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SNX11-201ENST00000359238 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
SNX11-201ENST00000359238 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
SNX11-201ENST00000359238 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
SNX11-201ENST00000359238 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
SNX11-201ENST00000359238 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SNX11-201ENST00000359238 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SNX11-201ENST00000359238 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 72.3 ms