RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
TPM1-205ENST00000357980 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
TPM1-205ENST00000357980 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
TPM1-205ENST00000357980 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
TPM1-205ENST00000357980 MT1GP13640 62 aa5.91□□□□□ -1.46
TPM1-205ENST00000357980 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
TPM1-205ENST00000357980 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
TPM1-205ENST00000357980 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
TPM1-205ENST00000357980 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
TPM1-205ENST00000357980 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
TPM1-205ENST00000357980 MT1MQ8N339 61 aa5.86□□□□□ -1.47
TPM1-205ENST00000357980 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
TPM1-205ENST00000357980 SPRR2EP22531 72 aa5.82□□□□□ -1.48
TPM1-205ENST00000357980 SPRR2BP35325 72 aa5.82□□□□□ -1.48
TPM1-205ENST00000357980 SPRR2AP35326 72 aa5.82□□□□□ -1.48
TPM1-205ENST00000357980 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
TPM1-205ENST00000357980 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
TPM1-205ENST00000357980 SPRR2DP22532 72 aa5.61□□□□□ -1.51
TPM1-205ENST00000357980 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
TPM1-205ENST00000357980 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
TPM1-205ENST00000357980 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
TPM1-205ENST00000357980 NEBP20929 6669 aa5.53□□□□□ -1.52
TPM1-205ENST00000357980 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
TPM1-205ENST00000357980 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
TPM1-205ENST00000357980 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
TPM1-205ENST00000357980 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
TPM1-205ENST00000357980 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
TPM1-205ENST00000357980 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
TPM1-205ENST00000357980 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
TPM1-205ENST00000357980 MT1AP04731 61 aa5.16□□□□□ -1.58
TPM1-205ENST00000357980 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
TPM1-205ENST00000357980 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
TPM1-205ENST00000357980 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
TPM1-205ENST00000357980 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
TPM1-205ENST00000357980 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
TPM1-205ENST00000357980 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.62
TPM1-205ENST00000357980 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
TPM1-205ENST00000357980 MT4P47944 62 aa4.87□□□□□ -1.63
TPM1-205ENST00000357980 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
TPM1-205ENST00000357980 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
TPM1-205ENST00000357980 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
TPM1-205ENST00000357980 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
TPM1-205ENST00000357980 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
TPM1-205ENST00000357980 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
TPM1-205ENST00000357980 MT3P25713 68 aa4.66□□□□□ -1.66
TPM1-205ENST00000357980 INE1O15225 51 aa4.63□□□□□ -1.67
TPM1-205ENST00000357980 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
TPM1-205ENST00000357980 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
TPM1-205ENST00000357980 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
TPM1-205ENST00000357980 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
TPM1-205ENST00000357980 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
TPM1-205ENST00000357980 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
TPM1-205ENST00000357980 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
TPM1-205ENST00000357980 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
TPM1-205ENST00000357980 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
TPM1-205ENST00000357980 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
TPM1-205ENST00000357980 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
TPM1-205ENST00000357980 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
TPM1-205ENST00000357980 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
TPM1-205ENST00000357980 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
TPM1-205ENST00000357980 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.8
TPM1-205ENST00000357980 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
TPM1-205ENST00000357980 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
TPM1-205ENST00000357980 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
TPM1-205ENST00000357980 PRM1P04553 51 aa3.74□□□□□ -1.81
TPM1-205ENST00000357980 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
TPM1-205ENST00000357980 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
TPM1-205ENST00000357980 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
TPM1-205ENST00000357980 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TPM1-205ENST00000357980 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
TPM1-205ENST00000357980 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
TPM1-205ENST00000357980 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
TPM1-205ENST00000357980 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TPM1-205ENST00000357980 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TPM1-205ENST00000357980 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TPM1-205ENST00000357980 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
TPM1-205ENST00000357980 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 97.8 ms