RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
NPAS3-202ENST00000356141 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
NPAS3-202ENST00000356141 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
NPAS3-202ENST00000356141 MT1EP04732 61 aa6.26□□□□□ -1.41
NPAS3-202ENST00000356141 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
NPAS3-202ENST00000356141 MT1LQ93083 61 aa6.19□□□□□ -1.42
NPAS3-202ENST00000356141 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
NPAS3-202ENST00000356141 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
NPAS3-202ENST00000356141 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
NPAS3-202ENST00000356141 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
NPAS3-202ENST00000356141 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
NPAS3-202ENST00000356141 MT1GP13640 62 aa5.93□□□□□ -1.46
NPAS3-202ENST00000356141 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
NPAS3-202ENST00000356141 MT1MQ8N339 61 aa5.89□□□□□ -1.47
NPAS3-202ENST00000356141 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
NPAS3-202ENST00000356141 NEBP20929 6669 aa5.8□□□□□ -1.48
NPAS3-202ENST00000356141 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
NPAS3-202ENST00000356141 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
NPAS3-202ENST00000356141 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
NPAS3-202ENST00000356141 SPRR2EP22531 72 aa5.7□□□□□ -1.5
NPAS3-202ENST00000356141 SPRR2BP35325 72 aa5.7□□□□□ -1.5
NPAS3-202ENST00000356141 SPRR2AP35326 72 aa5.7□□□□□ -1.5
NPAS3-202ENST00000356141 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
NPAS3-202ENST00000356141 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
NPAS3-202ENST00000356141 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
NPAS3-202ENST00000356141 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
NPAS3-202ENST00000356141 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
NPAS3-202ENST00000356141 LCE1FQ5T754 118 aa5.53□□□□□ -1.52
NPAS3-202ENST00000356141 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
NPAS3-202ENST00000356141 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
NPAS3-202ENST00000356141 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
NPAS3-202ENST00000356141 SPRR2DP22532 72 aa5.46□□□□□ -1.54
NPAS3-202ENST00000356141 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
NPAS3-202ENST00000356141 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
NPAS3-202ENST00000356141 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
NPAS3-202ENST00000356141 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
NPAS3-202ENST00000356141 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
NPAS3-202ENST00000356141 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
NPAS3-202ENST00000356141 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
NPAS3-202ENST00000356141 MT1AP04731 61 aa5.14□□□□□ -1.59
NPAS3-202ENST00000356141 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
NPAS3-202ENST00000356141 MT4P47944 62 aa5.01□□□□□ -1.61
NPAS3-202ENST00000356141 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
NPAS3-202ENST00000356141 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
NPAS3-202ENST00000356141 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
NPAS3-202ENST00000356141 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
NPAS3-202ENST00000356141 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
NPAS3-202ENST00000356141 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
NPAS3-202ENST00000356141 PRM1P04553 51 aa4.75□□□□□ -1.65
NPAS3-202ENST00000356141 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
NPAS3-202ENST00000356141 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
NPAS3-202ENST00000356141 MT3P25713 68 aa4.65□□□□□ -1.66
NPAS3-202ENST00000356141 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
NPAS3-202ENST00000356141 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
NPAS3-202ENST00000356141 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
NPAS3-202ENST00000356141 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
NPAS3-202ENST00000356141 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
NPAS3-202ENST00000356141 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
NPAS3-202ENST00000356141 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
NPAS3-202ENST00000356141 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
NPAS3-202ENST00000356141 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
NPAS3-202ENST00000356141 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
NPAS3-202ENST00000356141 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
NPAS3-202ENST00000356141 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
NPAS3-202ENST00000356141 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
NPAS3-202ENST00000356141 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
NPAS3-202ENST00000356141 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
NPAS3-202ENST00000356141 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
NPAS3-202ENST00000356141 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
NPAS3-202ENST00000356141 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
NPAS3-202ENST00000356141 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
NPAS3-202ENST00000356141 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
NPAS3-202ENST00000356141 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
NPAS3-202ENST00000356141 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
NPAS3-202ENST00000356141 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
NPAS3-202ENST00000356141 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
NPAS3-202ENST00000356141 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 81.3 ms